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潮滩沉积物中新型耐盐、氮同化细菌——沉积物生硫杆菌的鉴定

Characterization of Sulfitobacter sediminivivens sp. nov., A Novel Halotolerant, Nitrogen-Assimilating Bacterium from Tidal Flat Sediment.

作者信息

Kathiresan Akila, Park Hee-Yeon, Kim Hyung-Seop, Li Cong, Dong Ke, Srinivasan Sathiyaraj, Lee Sang-Seob

机构信息

Department of Integrative Biotechnology, Sungkyunkwan University, Natural Science Campus, 2066, Seobu-ro, Jangan-gu, Suwon-si, Gyeonggi-do, 16419, Republic of Korea.

Department of Marine Biology, College of Ocean Science and Technology, Kunsan National University, 558 Daehak-ro, Gunsan-si, Jeollabuk-do, 54150, Republic of Korea.

出版信息

Curr Microbiol. 2025 Aug 5;82(9):437. doi: 10.1007/s00284-025-04422-8.

Abstract

A novel halotolerant bacterial strain, designated MF3-043, was isolated from marine sediment collected at the Gunsan tidal flat, South Korea. The strain was characterized as a Gram-negative, aerobic, non-motile, oval-shaped rod bacterium that exhibited catalase and oxidase-positive activities. Colonies were circular, convex, and cream-white in color. The strain was able to grow at temperatures ranging from 4 to 30 °C (optimum, 25 °C), within a pH range of 6.0-9.0 (optimum, pH 7.0), and in the presence of 1-8% (w/v) NaCl (optimum, 2%). Phylogenetic analysis based on 16S rRNA gene sequences revealed the highest sequence similarity to Sulfitobacter mediterraneus KCTC 32188 (97.8%), Sulfitobacter marinus SW-265 (97.7%), Roseobacter fucihabitans B14 (97.6%), Sulfitobacter noctilucae NB-68 (97.4%), and Sulfitobacter indolifex HEL-45 (97.4%), confirming its affiliation with the genus Sulfitobacter. The genomic DNA G + C content was 56.5%. Ubiquinone-10 (Q-10) was the predominant respiratory quinone, and summed feature 8 (Cω7c) was the major fatty acid. Polar lipids included phosphatidylglycerol (PG), phosphatidylcholine (PC), diphosphatidylglycerol (DPG), one aminolipid, one phospholipid, and several unidentified lipids. The genome sequencing and digital DNA-DNA hybridization (dDDH) analyses further supported its distinction from closely related species. Based on a polyphasic taxonomic approach, strain MF3-043 is proposed as a novel species of the genus Sulfitobacter, named Sulfitobacter sediminivivens sp. nov. The type strain is MF3-043 (= KCTC 8706 = TBRC 19386).

摘要

从韩国群山潮滩采集的海洋沉积物中分离出一株新型耐盐细菌菌株,命名为MF3-043。该菌株的特征为革兰氏阴性、需氧、不运动、椭圆形杆菌,具有过氧化氢酶和氧化酶阳性活性。菌落呈圆形、凸起,颜色为乳白。该菌株能够在4至30°C(最适温度25°C)的温度范围内、pH值6.0 - 9.0(最适pH值7.0)以及1 - 8%(w/v)NaCl(最适2%)存在的条件下生长。基于16S rRNA基因序列的系统发育分析显示,其与地中海硫杆菌KCTC 32188(97.8%)、海洋硫杆菌SW-265(97.7%)、栖岩玫瑰杆菌B14(97.6%)、夜光硫杆菌NB-68(97.4%)和吲哚硫杆菌HEL-45(97.4%)的序列相似性最高,证实其属于硫杆菌属。基因组DNA的G + C含量为56.5%。泛醌-10(Q-10)是主要的呼吸醌,总和特征8(Cω7c)是主要脂肪酸。极性脂质包括磷脂酰甘油(PG)、磷脂酰胆碱(PC)、二磷脂酰甘油(DPG)、一种氨基脂质、一种磷脂以及几种未鉴定的脂质。基因组测序和数字DNA-DNA杂交(dDDH)分析进一步支持了它与近缘物种的区别。基于多相分类方法,菌株MF3-043被提议作为硫杆菌属的一个新物种,命名为栖泥硫杆菌新种(Sulfitobacter sediminivivens sp. nov.)。模式菌株为MF3-043(= KCTC 8706 = TBRC 19386)。

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