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使用全基因组测序(WGS)对一个多重自闭症谱系障碍(ASD)家系中的遗传变异进行基因研究。

Genetic Investigation of Inherited Variants in a Multiplex Autism Spectrum Disorder (ASD) Family Using Whole-Genome Sequencing (WGS).

作者信息

Gholizadeh Mehdi Agha, Behjati Farkhondeh, Garshasbi Masoud

机构信息

Department of Medical Genetics, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran.

Genetics Research Centre, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran.

出版信息

Iran J Public Health. 2025 May;54(5):1087-1097. doi: 10.18502/ijph.v54i5.18643.

Abstract

BACKGROUND

Autism Spectrum Disorder (ASD) is a complex neurodevelopmental condition characterized by early-onset challenges in social communication, repetitive behaviors, and clinical diversity. ASD is a highly heritable disorder, however, the exact mechanism by which inherited variants contribute to ASD in multiplex families, where more than one affected individual within a family is presented, remains unclear. We aimed to identify inherited genes in patients with ASD in a family with two affected siblings using Whole Genome Sequencing (WGS).

METHODS

We performed WGS on two patients from a single family diagnosed with ASD. All of the patients were diagnosed with ASD using the gold-standard Diagnostic and Statistical Manual of Mental Disorders, Fifth Edition (DSM-5). We used various bioinformatics approaches to identify a list of prioritized candidate genes that may be associated with ASD or other neurodevelopmental disorders in this family.

RESULTS

Our WGS analysis identified three potential candidate genes (:c.-82+866C>T, :c.668C>T;p. Thr223Ile and :c. -457G>A)) associated with ASD shared by the two patients. Additionally, utilizing various in-silico prediction tools and analysis of bioinformatics databases revealed that these rare variants are predicted to be deleterious and may contribute to ASDs. The identified variants are the first variants reported in ASD patients in the Iranian population that could be subjected to further validation studies.

CONCLUSION

These findings shed light on the genetic diversity of ASD within multiplex families and emphasize the complexity of genetic basis of ASD. Understanding the underlying genetic architecture of ASD is pivotal for advancing precise diagnostics and tailored therapeutic strategies.

摘要

背景

自闭症谱系障碍(ASD)是一种复杂的神经发育疾病,其特征为社交沟通方面的早期挑战、重复行为以及临床多样性。ASD是一种高度可遗传的疾病,然而,在多个家庭成员患病的多重家庭中,遗传变异导致ASD的确切机制仍不清楚。我们旨在通过全基因组测序(WGS)确定一个有两名患病兄弟姐妹的ASD患者家庭中的遗传基因。

方法

我们对来自一个被诊断患有ASD的单一家庭的两名患者进行了WGS。所有患者均使用金标准《精神疾病诊断与统计手册》第五版(DSM-5)被诊断为ASD。我们使用各种生物信息学方法来确定一份可能与该家庭中的ASD或其他神经发育障碍相关的优先候选基因列表。

结果

我们的WGS分析确定了两名患者共有的三个与ASD相关的潜在候选基因(:c.-82+866C>T,:c.668C>T;p.Thr223Ile和:c.-457G>A)。此外,利用各种计算机预测工具和生物信息学数据库分析表明,这些罕见变异预计具有有害性,可能导致ASD。所鉴定的变异是伊朗人群中ASD患者首次报道的变异,可进行进一步的验证研究。

结论

这些发现揭示了多重家庭中ASD的遗传多样性,并强调了ASD遗传基础的复杂性。了解ASD的潜在遗传结构对于推进精准诊断和量身定制的治疗策略至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2b3/12319458/c7a8a81c42ec/IJPH-54-1087-g001.jpg

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