Bayer Alexandra C, Pinzón Natalia, You Axel, Bergman Cinthia, Dragin Nadine, Corneau Aurélien, Truffault Frédérique, Noël Danièle, Martinaud Christophe, Le Panse Rozen, Berrih-Aknin Sonia, Vilquin Jean-Thomas
Sorbonne Université, INSERM, Institut de Myologie, GH Pitié-Salpêtrière, Centre de Recherche en Myologie, Paris, F-75013, France.
Department of Neurology and Immunobiology, Yale University School of Medicine, New Haven, CT, 06520, USA.
Stem Cell Res Ther. 2025 Aug 8;16(1):437. doi: 10.1186/s13287-025-04534-9.
Mesenchymal Stromal Cells (MSC) possess innate immunomodulatory properties, which can be significantly enhanced through co-culture with peripheral blood mononuclear cells (PBMC), making them attractive tools for the treatment of autoimmune and inflammatory diseases.
Leveraging a multi-omics approach encompassing RNA sequencing, flow and mass cytometry, secretome analysis, completed by functional evaluations, we investigated the mechanisms underpinning PBMC conditioning of MSC in vitro and their benefits in an animal model of Myasthenia gravis. MSC derived from human adipose tissue were left untreated in resting state (rMSC), conditioned by PBMC (cMSC), or activated by the pro-inflammatory molecule interferon (IFN)-γ (γMSC), then compared for their gene expression profiles, phenotypes and functional capacities.
RNA sequencing identified 244 differentially expressed genes in cMSC compared to rMSC, highlighting key immune mediators such as CCL2, CCL11, DPP4, ICAM1, IL6, PDCD1LG2, TNFRSF11B, TNIP1, TNIP3 and ZC3H12A and pinpointing genes involved in matrix remodeling, paracrine and autocrine communications. Comparatively, 2089 genes were differentially expressed between rMSC and γMSC, highlighting host defense, anti-viral response, NFκB signaling pathways modulated by IFN-γ. Flow and mass cytometry analyses revealed upregulation of the surface markers CD26, CD54, and CD273 and intracellular molecules IDO1 and PTGS2 in cMSC. In contrast, IFN-γ activation predominantly increased HLA-related markers while also enhancing the homogeneity of the populations. Together, these results underlined the treatment dependence of transcriptomic and phenotypic signatures. Secretome profiling identified 6 categories of modulated proteins, out of which 22 molecules potentially involved in PBMC conditioning and 40 implicated in cMSC-mediated immunomodulation. Functionally, cMSC induced modulation in PBMC subsets, raising the proportions of lymphocyte populations (CD4 Treg, CD8, B memory), underlining the multimodal effect of conditioning. Also, both a direct cell-cell contact and cMSC supernatants significantly suppressed activated T-cell proliferation in vitro. To confirm immunomodulation efficacy in vivo, cMSC were administrated to our humanized mouse model of Myasthenia Gravis and the treatment significantly halved disease severity from 2 weeks post-injection.
This integrative study establishes distinct conditioning signatures, suggests molecular mechanisms, and underscores the therapeutic potential of cMSC, offering a robust framework for advancing cell-based therapies in autoimmune diseases.
间充质基质细胞(MSC)具有先天免疫调节特性,通过与外周血单核细胞(PBMC)共培养可显著增强其免疫调节特性,这使其成为治疗自身免疫性疾病和炎症性疾病的有吸引力的工具。
利用多组学方法,包括RNA测序、流式细胞术和质谱细胞术、分泌组分析,并通过功能评估完成,我们研究了体外PBMC对MSC进行预处理的机制及其在重症肌无力动物模型中的益处。将源自人类脂肪组织的MSC在静止状态下不进行处理(rMSC),用PBMC进行预处理(cMSC),或用促炎分子干扰素(IFN)-γ激活(γMSC),然后比较它们的基因表达谱、表型和功能能力。
RNA测序确定,与rMSC相比,cMSC中有244个差异表达基因,突出了关键免疫介质,如CCL2、CCL11、DPP4、ICAM1、IL6、PDCD1LG2、TNFRSF11B、TNIP1、TNIP3和ZC3H12A,并确定了参与基质重塑、旁分泌和自分泌通讯的基因。相比之下,rMSC和γMSC之间有2089个基因差异表达,突出了宿主防御、抗病毒反应以及由IFN-γ调节的NFκB信号通路。流式细胞术和质谱细胞术分析显示,cMSC中表面标志物CD26、CD54和CD273以及细胞内分子IDO1和PTGS2上调。相比之下,IFN-γ激活主要增加了与HLA相关的标志物,同时也提高了群体的同质性。这些结果共同强调了转录组和表型特征对处理的依赖性。分泌组分析确定了6类调节蛋白,其中22种分子可能参与PBMC预处理,40种分子与cMSC介导的免疫调节有关。在功能上,cMSC诱导PBMC亚群发生调节,提高了淋巴细胞群体(CD4 Treg、CD8、B记忆细胞)的比例,突出了预处理的多模式效应。此外,直接的细胞间接触和cMSC上清液在体外均显著抑制活化T细胞的增殖。为了在体内确认免疫调节效果,将cMSC给予我们的重症肌无力人源化小鼠模型,治疗后从注射后2周起疾病严重程度显著减半。
这项综合研究确定了不同的预处理特征,提出了分子机制,并强调了cMSC的治疗潜力,为推进自身免疫性疾病的细胞治疗提供了一个有力的框架。