Suppr超能文献

小浅黄地花蜂(Scopoli,1763年)的基因组序列。

The genome sequence of the Small Sallow Mining Bee, (Scopoli, 1763).

作者信息

Crowley Liam M

机构信息

Department of Biology, University of Oxford, Oxford, England, UK.

出版信息

Wellcome Open Res. 2025 Jun 2;10:290. doi: 10.12688/wellcomeopenres.24301.1. eCollection 2025.

Abstract

We present a genome assembly from a female specimen of (Small Sallow Mining Bee; Arthropoda; Insecta; Hymenoptera; Andrenidae). The genome sequence has a total length of 563.05 megabases. The assembly is scaffolded into 7 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 20.36 kilobases. Gene annotation of this assembly on Ensembl identified 12,005 protein-coding genes.

摘要

我们展示了一种(小浅黄地蜂;节肢动物门;昆虫纲;膜翅目;地蜂科)雌性标本的基因组组装结果。基因组序列全长563.05兆碱基。该组装被构建成7条染色体假分子。线粒体基因组也已组装完成,长度为20.36千碱基。在Ensembl上对该组装进行的基因注释识别出12,005个蛋白质编码基因。

相似文献

1
The genome sequence of the Small Sallow Mining Bee, (Scopoli, 1763).
Wellcome Open Res. 2025 Jun 2;10:290. doi: 10.12688/wellcomeopenres.24301.1. eCollection 2025.
2
The genome sequence of the Tawny Mining Bee, (Müller, 1766).
Wellcome Open Res. 2023 Jun 21;8:258. doi: 10.12688/wellcomeopenres.19510.1. eCollection 2023.
3
The genome sequence of the big-headed mining bee, (Stephens, 1846).
Wellcome Open Res. 2024 Mar 1;9:111. doi: 10.12688/wellcomeopenres.21003.1. eCollection 2024.
4
The genome sequence of the short-fringed mining bee, (Kirby, 1802).
Wellcome Open Res. 2023 Aug 30;8:373. doi: 10.12688/wellcomeopenres.19756.1. eCollection 2023.
5
The genome sequence of the Orange-tailed Mining Bee, (Fabricius, 1781).
Wellcome Open Res. 2023 Sep 8;8:396. doi: 10.12688/wellcomeopenres.19982.1. eCollection 2023.
6
The genome sequence of Lathbury's Nomad Bee, (Kirby, 1802).
Wellcome Open Res. 2025 Apr 23;10:211. doi: 10.12688/wellcomeopenres.24013.1. eCollection 2025.
7
The genome sequence of the Large Scabious Mining Bee, (Fabricius, 1775).
Wellcome Open Res. 2023 May 18;8:224. doi: 10.12688/wellcomeopenres.19438.1. eCollection 2023.
8
The genome sequence of an ichneumonid wasp, (Christ, 1791).
Wellcome Open Res. 2025 May 20;10:262. doi: 10.12688/wellcomeopenres.24267.1. eCollection 2025.
9
The genome sequence of the Small Scabious Mining Bee, Fabricius, 1776.
Wellcome Open Res. 2024 Aug 12;9:447. doi: 10.12688/wellcomeopenres.22772.1. eCollection 2024.
10
The genome sequence of the Coppice Mining Bee, (Linnaeus, 1758).
Wellcome Open Res. 2025 Feb 24;10:102. doi: 10.12688/wellcomeopenres.23746.1. eCollection 2025.

本文引用的文献

1
A DNA barcoding framework for taxonomic verification in the Darwin Tree of Life Project.
Wellcome Open Res. 2024 Jun 24;9:339. doi: 10.12688/wellcomeopenres.21143.1. eCollection 2024.
2
MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads.
BMC Bioinformatics. 2023 Jul 18;24(1):288. doi: 10.1186/s12859-023-05385-y.
3
A sampling strategy for genome sequencing the British terrestrial arthropod fauna.
Wellcome Open Res. 2023 Mar 20;8:123. doi: 10.12688/wellcomeopenres.18925.1. eCollection 2023.
4
5
YaHS: yet another Hi-C scaffolding tool.
Bioinformatics. 2023 Jan 1;39(1). doi: 10.1093/bioinformatics/btac808.
6
UniProt: the Universal Protein Knowledgebase in 2023.
Nucleic Acids Res. 2023 Jan 6;51(D1):D523-D531. doi: 10.1093/nar/gkac1052.
7
Gfastats: conversion, evaluation and manipulation of genome sequences using assembly graphs.
Bioinformatics. 2022 Sep 2;38(17):4214-4216. doi: 10.1093/bioinformatics/btac460.
9
Towards complete and error-free genome assemblies of all vertebrate species.
Nature. 2021 Apr;592(7856):737-746. doi: 10.1038/s41586-021-03451-0. Epub 2021 Apr 28.
10
Sensitive protein alignments at tree-of-life scale using DIAMOND.
Nat Methods. 2021 Apr;18(4):366-368. doi: 10.1038/s41592-021-01101-x. Epub 2021 Apr 7.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验