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使用支持向量机对来自髂嵴和肱骨头的骨髓抽吸物进行蛋白质组学分析。

Proteomic Analysis of BMAC from the Iliac Crest and Humeral Head Using Support Vector Machines.

作者信息

Herna Colin, Cipriani Madison, Zhang Yu, Sachdev Ranjan, Jedlicka Sabrina

机构信息

Lehigh University. Bioengineering, 5 E. Packer Ave, Bethlehem, Pennsylvania 18015, United States.

Sachdev Orthopaedics, 3735 Nazareth Rd, 302 A, Easton, Pennsylvania 18045, United States.

出版信息

ACS Omega. 2025 Jul 29;10(31):34975-34985. doi: 10.1021/acsomega.5c03945. eCollection 2025 Aug 12.

Abstract

The aim of this study was to analyze the proteomic differences in bone marrow aspirate concentrate (BMAC) between extraction sites, specifically, the iliac crest and humeral head. Using support vector machine (SVM) models, SVM-(linear) and SVM-(rbf), we identified six key proteins (MCSF, CD14, CD40, CD163, Ephrin-A4, and Matrilin-3) as essential for distinguishing between these sites. The results indicate that site-to-site proteomic differences are likely influenced by the surrounding tissues of each extraction site. Higher levels of chondrogenic and osteogenic proteins in the humeral head BMAC in addition to immune-modulatory proteins in the iliac crest BMAC suggest site-specific proteomic profiles. This study provides insights that may assist clinicians in selecting site-appropriate BMAC for therapeutic applications and inform future research into BMAC proteomics.

摘要

本研究的目的是分析骨髓抽吸浓缩物(BMAC)在不同提取部位,特别是髂嵴和肱骨头之间的蛋白质组差异。使用支持向量机(SVM)模型,即SVM-(线性)和SVM-(径向基函数),我们确定了六种关键蛋白质(巨噬细胞集落刺激因子、CD14、CD40、CD163、 Ephrin-A4和基质金属蛋白酶3)对于区分这些部位至关重要。结果表明,不同部位之间的蛋白质组差异可能受每个提取部位周围组织的影响。肱骨头BMAC中较高水平的软骨生成和成骨蛋白,以及髂嵴BMAC中的免疫调节蛋白表明存在部位特异性蛋白质组特征。本研究提供的见解可能有助于临床医生为治疗应用选择合适部位的BMAC,并为未来BMAC蛋白质组学的研究提供参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c763/12355255/486bde825541/ao5c03945_0001.jpg

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