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细菌表面的血红素结合DNA结构促进细胞外电子转移。

Hemin-binding DNA structures on the surface of bacteria promote extracellular electron transfer.

作者信息

Ajunwa Obinna M, Minero Gabriel Antonio S, Jensen Sissel D, Meyer Rikke L

机构信息

Interdisciplinary Nanoscience Center (iNANO), Aarhus University, Gustav Wieds Vej 14, 8000 Aarhus, Denmark.

Center for Electromicrobiology, Department of Biology, Aarhus University, Ny Munkegade 114, DK-8000 Aarhus C, Denmark.

出版信息

Nucleic Acids Res. 2025 Aug 11;53(15). doi: 10.1093/nar/gkaf790.

DOI:10.1093/nar/gkaf790
PMID:40842236
Abstract

Non-canonical DNA structures have been recently identified in bacterial biofilms, but their functional roles remain poorly understood. Here, we demonstrate that G-quadruplex (G4) DNA structures complexed with hemin enable extracellular electron transfer (EET) in biofilms. Using Staphylococcusepidermidis as a model organism, we show that extracellular DNA and hemin are essential for EET, with surface-associated G4-DNA/hemin complexes transferring electrons from bacteria to electrodes under anoxic conditions. Adding G4-DNA and hemin to growing biofilms promoted stable EET for days, demonstrating that these complexes serve as robust electrical conduits. The structural properties of G4-DNA, with its stacked guanine quartets facilitating π-π interactions with hemin's porphyrin ring, create an effective electron transfer pathway. Additionally, the G4-DNA/hemin complex functions as a peroxidase-like DNAzyme, transferring electrons from bacteria to H2O2. This study reveals a previously unknown functional role for G4-DNA structures in biofilms, establishing them as components of bacterial EET. Our findings provide new insights into how non-canonical DNA structures contribute to bacterial energy conservation under oxygen limitation, and potentially also to their defense against oxidative stress during infection.

摘要

非经典DNA结构最近在细菌生物膜中被发现,但其功能作用仍知之甚少。在此,我们证明与血红素复合的G-四链体(G4)DNA结构能够在生物膜中实现细胞外电子转移(EET)。以表皮葡萄球菌作为模式生物,我们表明细胞外DNA和血红素对EET至关重要,表面相关的G4-DNA/血红素复合物在缺氧条件下将电子从细菌转移到电极。向生长中的生物膜中添加G4-DNA和血红素可促进数天的稳定EET,表明这些复合物可作为强大的电导体。G4-DNA的结构特性,其堆叠的鸟嘌呤四重体促进与血红素卟啉环的π-π相互作用,创造了一条有效的电子转移途径。此外,G4-DNA/血红素复合物作为一种类似过氧化物酶的脱氧核酶,将电子从细菌转移到H2O2。这项研究揭示了G4-DNA结构在生物膜中以前未知的功能作用,将它们确立为细菌EET的组成部分。我们的发现为非经典DNA结构如何在氧气限制下促进细菌能量守恒以及在感染期间对氧化应激的防御提供了新的见解。

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本文引用的文献

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Dental biofilms contain DNase I-resistant Z-DNA and G-quadruplexes but alternative DNase overcomes this resistance.牙菌斑含有抗脱氧核糖核酸酶I的Z-DNA和G-四链体,但替代的脱氧核糖核酸酶可克服这种抗性。
NPJ Biofilms Microbiomes. 2025 May 19;11(1):80. doi: 10.1038/s41522-025-00694-x.
2
Cell-free hemoglobin and hemin catalyzing triclosan oxidative coupling in plasma: A novel exogenous phenolic pollutants coupling pathway.无细胞血红蛋白和血红素在血浆中催化三氯生的氧化偶联:一种新的外源性酚类污染物偶联途径。
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Programmable DNA Interphase Layers for High-Performance Anode-Free Lithium Metal Batteries.
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Adv Mater. 2024 Jun;36(26):e2401114. doi: 10.1002/adma.202401114. Epub 2024 Apr 4.
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Electrofermentation increases concentration of poly γ-glutamic acid in Bacillus subtilis biofilms.电发酵提高枯草芽孢杆菌生物膜中聚γ-谷氨酸的浓度。
Microb Biotechnol. 2024 Mar;17(3):e14426. doi: 10.1111/1751-7915.14426.
5
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Key players in the regulation of iron homeostasis at the host-pathogen interface.宿主-病原体界面中铁稳态调节的关键因素。
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Q Rev Biophys. 2023 Jan 11;56:e1. doi: 10.1017/S0033583522000130.
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