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利用偶极电子顺磁共振波谱法定量蛋白质构象集合的最新进展。

Recent advances in quantifying protein conformational ensembles with dipolar EPR spectroscopy.

作者信息

Dastvan Reza, Stoll Stefan

机构信息

Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO 63104, USA.

Department of Chemistry, University of Washington, Seattle, WA 98195, USA.

出版信息

Curr Opin Struct Biol. 2025 Aug 23;94:103139. doi: 10.1016/j.sbi.2025.103139.

Abstract

This perspective highlights recent applications and technological progress in dipolar electron paramagnetic resonance (EPR) spectroscopy, including double electron-electron resonance (DEER) spectroscopy. These methods provide nanoscale distance distributions between site-specific spin labels in biomacromolecules. The resulting data are particularly well suited for quantifying the structure and energetics of conformational ensembles of multi-state and flexible proteins. Recent applications span a wide range of systems and are accompanied by innovations in spin labeling, deuteration, in-cell measurements, integrative multi-technique approaches, and novel computational modeling methods combined with structure prediction tools.

摘要

这一观点突出了偶极电子顺磁共振(EPR)光谱学,包括双电子-电子共振(DEER)光谱学的近期应用和技术进展。这些方法可提供生物大分子中位点特异性自旋标记之间的纳米级距离分布。所得数据特别适合于量化多状态和柔性蛋白质构象集合的结构和能量学。近期的应用涵盖了广泛的系统,并伴随着自旋标记、氘代、细胞内测量、综合多技术方法以及与结构预测工具相结合的新型计算建模方法等方面的创新。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86a2/12413296/01c9b5e39359/nihms-2107667-f0001.jpg

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