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玉米(L.)抗性候选基因的转录组特征分析

Transcriptomic Characterization of Candidate Genes for Resistance in Maize ( L.).

作者信息

Sobiech Aleksandra, Tomkowiak Agnieszka, Jamruszka Tomasz, Kosiada Tomasz, Spychała Julia, Lenort Maciej, Bocianowski Jan

机构信息

Plant Breeding and Acclimatization Institute-National Research Institute in Radzików, 05-870 Błonie, Poland.

Department of Genetics and Plant Breeding, Faculty of Agronomy, Horticulture and Biotechnology, Poznań University of Life Sciences, Dojazd 11, 60-632 Poznań, Poland.

出版信息

Pathogens. 2025 Aug 6;14(8):779. doi: 10.3390/pathogens14080779.

DOI:10.3390/pathogens14080779
PMID:40872289
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12389312/
Abstract

Fusarium diseases are among the most dangerous fungal diseases of plants. To date, there are no plant protectants that completely prevent fusariosis. Current breeding trends are therefore focused on increasing genetic resistance. While global modern maize breeding relies on various molecular genetics techniques, they are useless without a precise characterization of genomic regions that determine plant physiological responses to fungi. The aim of this study was thus to characterize the expression of candidate genes that were previously reported by our team as harboring markers linked to fusarium resistance in maize. The plant material included one susceptible and four resistant varieties. Biotic stress was induced in adult plants by inoculation with fungal spores under controlled conditions. qRT-PCR was performed. The analysis focused on four genes that encode for GDSL esterase/lipase (LOC100273960), putrescine hydroxycinnamyltransferase (LOC103649226), peroxidase 72 (LOC100282124), and uncharacterized protein (LOC100501166). Their expression showed differences between analyzed time points and varieties, peaking at 6 hpi. The resistant varieties consistently showed higher levels of expression compared to the susceptible variety, indicating their stronger defense responses. Moreover, to better understand the function of these genes, their expression in various organs and tissues was also evaluated using publicly available transcriptomic data. Our results are consistent with literature reports that clearly indicate the involvement of these genes in the resistance response to fusarium. Thus, they further emphasize the high usefulness of the previously selected markers in breeding programs to select fusarium-resistant maize genotypes.

摘要

镰刀菌病害是植物最危险的真菌病害之一。迄今为止,尚无能完全预防镰刀菌病的植物保护剂。因此,当前的育种趋势集中在增强遗传抗性上。虽然全球现代玉米育种依赖于各种分子遗传学技术,但如果不能精确表征决定植物对真菌生理反应的基因组区域,这些技术就毫无用处。因此,本研究的目的是表征我们团队先前报道的与玉米抗镰刀菌性相关标记的候选基因的表达情况。植物材料包括一个感病品种和四个抗病品种。在可控条件下,通过接种真菌孢子在成年植株中诱导生物胁迫。进行了qRT-PCR。分析聚焦于四个基因,它们分别编码GDSL酯酶/脂肪酶(LOC100273960)、腐胺羟基肉桂酰转移酶(LOC103649226)、过氧化物酶72(LOC100282124)和未知蛋白(LOC100501166)。它们的表达在分析的时间点和品种之间存在差异,在接种后6小时达到峰值。与感病品种相比,抗病品种的表达水平始终较高,表明它们具有更强的防御反应。此外,为了更好地理解这些基因的功能,还利用公开的转录组数据评估了它们在各种器官和组织中的表达。我们的结果与文献报道一致,这些报道清楚地表明这些基因参与了对镰刀菌的抗性反应。因此,它们进一步强调了先前选择的标记在育种计划中用于选择抗镰刀菌玉米基因型的高度实用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/3a37bb6efd2c/pathogens-14-00779-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/b575a3a23f9f/pathogens-14-00779-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/684eb60e0590/pathogens-14-00779-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/294da9e6d3f5/pathogens-14-00779-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/346c3c9b69da/pathogens-14-00779-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/c3c1d6afcd17/pathogens-14-00779-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/b2194956eb1d/pathogens-14-00779-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/c5986369d7d4/pathogens-14-00779-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/cb7205659f5f/pathogens-14-00779-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/3a37bb6efd2c/pathogens-14-00779-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/b575a3a23f9f/pathogens-14-00779-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/684eb60e0590/pathogens-14-00779-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/294da9e6d3f5/pathogens-14-00779-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/346c3c9b69da/pathogens-14-00779-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/c3c1d6afcd17/pathogens-14-00779-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/b2194956eb1d/pathogens-14-00779-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/c5986369d7d4/pathogens-14-00779-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/cb7205659f5f/pathogens-14-00779-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc2b/12389312/3a37bb6efd2c/pathogens-14-00779-g007.jpg

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本文引用的文献

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Identification of SNP and SilicoDArT Markers and Characterization of Their Linked Candidate Genes Associated with Maize Smut Resistance.鉴定与玉米黑粉病抗性相关的 SNP 和 SilicoDArT 标记及其连锁候选基因。
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New Insights into Involvement of Low Molecular Weight Proteins in Complex Defense Mechanisms in Higher Plants.
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Using NGS Technology and Association Mapping to Identify Candidate Genes Associated with Fusarium Stalk Rot Resistance.利用 NGS 技术和关联作图鉴定与镰刀菌茎腐病抗性相关的候选基因。
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Arabidopsis PDE1 confers phosphate-deficiency tolerance in primary root growth.拟南芥 PDE1 赋予主根生长对磷酸盐缺乏的耐受性。
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