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胶质瘤相关肠道微生物群的预测性机器学习模型构建

Construction of Predictive Machine Learning Model of Glioma-Associated Gut Microbiota.

作者信息

Li Ze, Zhao Kai, Liu Hongyu, Liu Jialin, Chen Xu, Hu Wentao, Wen Er, Zhang Kai, Chen Ling

机构信息

Department of Neurosurgery, First Medical Center of the Chinese PLA General Hospital, Beijing, People's Republic of China.

China Medical University, Shenyang, People's Republic of China.

出版信息

Brain Behav. 2025 Sep;15(9):e70843. doi: 10.1002/brb3.70843.

DOI:10.1002/brb3.70843
PMID:40923121
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12417957/
Abstract

BACKGROUND

The gut microbiota plays a crucial role in the development of glioma. With the evolution of artificial intelligence technology, applying AI to analyze the vast amount of data from the gut microbiome indicates the potential that artificial intelligence and computational biology hold in transforming medical diagnostics and personalized medicine.

METHODS

We conducted metagenomic sequencing on stool samples from 42 patients diagnosed with glioma after operation and 30 non-intracranial tumor patients and developed a Gradient Boosting Machine (GBM) machine learning model to predict the glioma patients based on the gut microbiome data.

RESULTS

The AUC-ROC for the GBM model was 0.79, indicating a good level of discriminative ability.

CONCLUSIONS

This method's efficacy in discriminating between glioma cells and normal controls underscores the potential of machine learning models in leveraging large datasets for clinical insights.

摘要

背景

肠道微生物群在胶质瘤的发展中起着至关重要的作用。随着人工智能技术的发展,应用人工智能分析来自肠道微生物组的大量数据表明了人工智能和计算生物学在变革医学诊断和个性化医疗方面的潜力。

方法

我们对42例术后诊断为胶质瘤的患者和30例非颅内肿瘤患者的粪便样本进行了宏基因组测序,并开发了一种梯度提升机(GBM)机器学习模型,以基于肠道微生物组数据预测胶质瘤患者。

结果

GBM模型的AUC-ROC为0.79,表明具有良好的判别能力。

结论

该方法在区分胶质瘤细胞与正常对照方面的有效性强调了机器学习模型利用大型数据集获取临床见解的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5330/12417957/790c64a09466/BRB3-15-e70843-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5330/12417957/790c64a09466/BRB3-15-e70843-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5330/12417957/790c64a09466/BRB3-15-e70843-g001.jpg

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本文引用的文献

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Deciphering the contributions of fecal microbiota from patients with high-grade glioma to tumor development in a humanized microbiome mouse model of glioma.在胶质瘤人源化微生物组小鼠模型中,解析高级别胶质瘤患者粪便微生物群对肿瘤发展的贡献。
Neurooncol Adv. 2025 Apr 25;7(1):vdaf085. doi: 10.1093/noajnl/vdaf085. eCollection 2025 Jan-Dec.
2
Microbiota and glioma: a new perspective from association to clinical translation.微生物群与神经胶质瘤:从关联到临床转化的新视角。
Gut Microbes. 2024 Jan-Dec;16(1):2394166. doi: 10.1080/19490976.2024.2394166. Epub 2024 Aug 26.
3
Exploring the gut microbiota and its potential as a biomarker in gliomas.
探讨肠道微生物群及其作为脑胶质瘤生物标志物的潜力。
Biomed Pharmacother. 2024 Apr;173:116420. doi: 10.1016/j.biopha.2024.116420. Epub 2024 Mar 11.
4
Immunotherapy: a promising approach for glioma treatment.免疫疗法:胶质母细胞瘤治疗的一种有前途的方法。
Front Immunol. 2023 Sep 7;14:1255611. doi: 10.3389/fimmu.2023.1255611. eCollection 2023.
5
Association of Tumor Treating Fields (TTFields) therapy with survival in newly diagnosed glioblastoma: a systematic review and meta-analysis.肿瘤治疗电场(TTFields)治疗与新诊断胶质母细胞瘤患者生存的关联:系统评价和荟萃分析。
J Neurooncol. 2023 Aug;164(1):1-9. doi: 10.1007/s11060-023-04348-w. Epub 2023 Jul 26.
6
combined with inhibit glioma growth in mice through modulating PI3K/AKT pathway and gut microbiota.联合通过调节PI3K/AKT通路和肠道微生物群抑制小鼠胶质瘤生长。
Front Microbiol. 2022 Sep 6;13:986837. doi: 10.3389/fmicb.2022.986837. eCollection 2022.
7
Current understanding of the human microbiome in glioma.当前对胶质瘤中人类微生物组的认识。
Front Oncol. 2022 Aug 8;12:781741. doi: 10.3389/fonc.2022.781741. eCollection 2022.
8
Glioma and the gut-brain axis: opportunities and future perspectives.胶质瘤与肠-脑轴:机遇与未来展望。
Neurooncol Adv. 2022 Apr 14;4(1):vdac054. doi: 10.1093/noajnl/vdac054. eCollection 2022 Jan-Dec.
9
Gut Microbiome Alterations Affect Glioma Development and Foxp3 Expression in Tumor Microenvironment in Mice.肠道微生物群改变影响小鼠胶质瘤的发展及肿瘤微环境中Foxp3的表达。
Front Oncol. 2022 Mar 8;12:836953. doi: 10.3389/fonc.2022.836953. eCollection 2022.
10
Temozolomide-Induced Changes in Gut Microbial Composition in a Mouse Model of Brain Glioma.替莫唑胺诱导脑胶质瘤小鼠模型肠道微生物组成变化。
Drug Des Devel Ther. 2021 Apr 21;15:1641-1652. doi: 10.2147/DDDT.S298261. eCollection 2021.