Lim Kai Shi, Periñan Maria Teresa, Chew Elaine Guo Yan, Lee Paul Suhwan, Akçimen Fulya, Lim Jia Lun, Koretsky Mathew J, Funayama Manabu, Yoshino Hiroyo, Hattori Nobutaka, Kaiyrzhanov Rauan, Houlden Henry, Isayan Mariam, Tay Yi Wen, Toh Tzi Shin, Lit Lei-Cheng, Khairul Anuar Anis Nadhirah, Ding Hans Xing, Screven Laurel, Mohamed Ibrahim Norlinah, Lin Chin-Hsien, Kim Han-Joon, Lee Jee-Young, Chung Sun Ju, Foo Jia Nee, Tan Eng-King, Lim Shen-Yang, Tan Ai Huey, Bandres-Ciga Sara, Ahmad-Annuar Azlina
Department of Biomedical Science, Faculty of Medicine, Universiti Malaya, 50603 Kuala Lumpur, Malaysia.
Department of Medicine, Faculty of Medicine, Universiti Malaya, 50603 Kuala Lumpur, Malaysia.
medRxiv. 2025 Sep 2:2025.08.28.25333987. doi: 10.1101/2025.08.28.25333987.
Common and rare variants in influence Parkinson's disease (PD) risk across diverse populations. We investigated the p.A419V variant across multiple ancestry cohorts comprising over 200,000 individuals. In cases of East Asian ancestry, the variant was significantly associated with increased risk (OR = 2.9; 95% CI: 1.66-5.10; p = 0.0002), It lies on rare EAS haplotypes, and was not in linkage disequilibrium with other coding variants. Although not significant, meta-analysis of age of onset in EAS cases show a suggestive trend (β = -0.89 years; SE = 1.01; = 0.380). LRRK2 protein modelling prediction indicated that binding sites for RAB8A, RAB10, RAB29 were in close proximity to the p.A419V variant within the ARM domain. Together, these findings confirm the p.A419V as a significant PD risk factor in EAS populations, as well as highlight disease-relevant variants in the ARM domain and the link with LRRK2-RAB signaling pathway.
常见和罕见变异影响不同人群患帕金森病(PD)的风险。我们在包含超过200,000人的多个祖先队列中研究了p.A419V变异。在东亚血统的病例中,该变异与风险增加显著相关(OR = 2.9;95% CI:1.66 - 5.10;p = 0.0002),它位于罕见的东亚单倍型上,并且与其他LRRK2编码变异不存在连锁不平衡。虽然不显著,但对东亚病例发病年龄的荟萃分析显示出一种提示性趋势(β = -0.89岁;SE = 1.01;p = 0.380)。LRRK2蛋白建模预测表明,RAB8A、RAB10、RAB29的结合位点在ARM结构域内与p.A419V变异紧密相邻。总之,这些发现证实p.A419V是东亚人群中一个重要的PD风险因素,同时突出了ARM结构域中与疾病相关的变异以及与LRRK2 - RAB信号通路的联系。