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关于球状蛋白特异性结合位点上“非特异性”结合的普遍性

On the prevalence of "nonspecific" binding at the specific binding sites of globular proteins.

作者信息

Glazer A N

出版信息

Proc Natl Acad Sci U S A. 1970 Apr;65(4):1057-63. doi: 10.1073/pnas.65.4.1057.

DOI:10.1073/pnas.65.4.1057
PMID:5266147
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC283022/
Abstract

Strong binding of dyes to simple globular proteins takes place predominantly in areas overlapping the binding sites for substrates, coenzymes and prosthetic groups, in preference to other regions of the protein surface. The structure of the dyes bears no obvious relationship to that of the normal ligands. It is proposed that this phenomenon is a reflection of the special stereochemical features of such sites, their hydrophobicity relative to other portions of the protein surface, and, possibly, greater flexibility in these regions of the protein molecule. The binding properties of antibodies and bovine serum albumin are discussed in relation to this apparent versatility of protein binding sites towards structurally unrelated organic ligands.

摘要

染料与简单球蛋白的强烈结合主要发生在与底物、辅酶和辅基结合位点重叠的区域,而不是蛋白质表面的其他区域。染料的结构与正常配体的结构没有明显关系。有人提出,这种现象反映了这些位点的特殊立体化学特征、它们相对于蛋白质表面其他部分的疏水性,以及蛋白质分子这些区域可能更大的灵活性。结合抗体和牛血清白蛋白的结合特性,讨论了蛋白质结合位点对结构不相关有机配体的这种明显通用性。

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本文引用的文献

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The active site and mechanism of action of bovine pancreatic ribonuclease. 4. The activity in inert organic solvents and alcohols.牛胰核糖核酸酶的活性位点与作用机制。4. 在惰性有机溶剂和醇类中的活性
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Inhibition of alpha-chymotrypsin by diethyl ether and certain alcohols: a new type of competitive inhibition.二乙醚和某些醇对α-糜蛋白酶的抑制作用:一种新型竞争性抑制作用。
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Some factors in the interpretation of protein denaturation.蛋白质变性解读中的一些因素。
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HYDROPHOBIC INTERACTIONS OF INHIBITORS WITH YEAST ALCOHOL DEHYDROGENASE.抑制剂与酵母乙醇脱氢酶的疏水相互作用
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TRANSESTERIFICATION REACTIONS CATALYZED BY TRYPSIN.
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ASPECTS OF THE CHEMICAL MECHANISM OF COMPLEX FORMATION BETWEEN ACETYLCHOLINESTERASE AND ACETYLCHOLINE-RELATED COMPOUNDS.乙酰胆碱酯酶与乙酰胆碱相关化合物形成复合物的化学机制方面
J Med Chem. 1964 Nov;7:768-75. doi: 10.1021/jm00336a021.
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The trypsin-catalyzed hydrolysis of benzoyl-L-arginine ethyl ester. I. The kinetics in dioxane-water mixtures.胰蛋白酶催化的苯甲酰-L-精氨酸乙酯水解反应。I. 二氧六环-水混合溶剂中的动力学
Biochim Biophys Acta. 1960 Feb 12;38:64-79. doi: 10.1016/0006-3002(60)91196-3.