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兔网织红细胞核糖体的一种可能结构。模型构建练习。

A possible structure of the rabbit reticulocyte ribosome. An exercise in model building.

作者信息

Cox R A, Bonanou S A

出版信息

Biochem J. 1969 Oct;114(4):769-74. doi: 10.1042/bj1140769.

DOI:10.1042/bj1140769
PMID:5343780
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1184963/
Abstract

It is suggested that the location of each of the diverse ribosomal proteins in the ribosome, or in the ribosomal subparticles in their native or derived forms, is determined by the nucleotide sequence of the 16s and 23-30s RNA moieties, i.e. that the 16s and 23-30s RNA species provide a unique binding site for each species of ribosomal protein. The ways of assembling such a thread into a ribosome-like structure appear limited if the ribosome is largely stabilized by protein-protein interactions. The nucleoprotein thread was built into a structure, having the general features of a hollow cylinder, that is consistent with the known dimensions and properties of the rabbit reticulocyte ribosome. It appears possible to test the model by experiment.

摘要

有人提出,各种核糖体蛋白在核糖体中,或在其天然或衍生形式的核糖体亚颗粒中的位置,是由16S和23 - 30S RNA部分的核苷酸序列决定的,也就是说,16S和23 - 30S RNA种类为每种核糖体蛋白提供了独特的结合位点。如果核糖体主要通过蛋白质 - 蛋白质相互作用而稳定,那么将这样一条链组装成类似核糖体结构的方式似乎是有限的。核蛋白链被构建成一种具有空心圆柱体一般特征的结构,这与兔网织红细胞核糖体的已知尺寸和性质相一致。通过实验来检验该模型似乎是可行的。

相似文献

1
A possible structure of the rabbit reticulocyte ribosome. An exercise in model building.兔网织红细胞核糖体的一种可能结构。模型构建练习。
Biochem J. 1969 Oct;114(4):769-74. doi: 10.1042/bj1140769.
2
The effect of pancreatic ribonuclease on rabbit reticulocyte ribosomes and its interpretation in terms of ribosome structure.胰腺核糖核酸酶对兔网织红细胞核糖体的作用及其在核糖体结构方面的解释。
Biochem J. 1969 Oct;114(4):753-67. doi: 10.1042/bj1140753.
3
A study of the effects of reaction with formaldehyde on some optical and physical properties of reticulocyte ribosomes.关于甲醛反应对网织红细胞核糖体某些光学和物理性质影响的研究。
Biochem J. 1969 Oct;114(4):743-51. doi: 10.1042/bj1140743.
4
Correlation of the expansion segments in mammalian rRNA with the fine structure of the 80 S ribosome; a cryoelectron microscopic reconstruction of the rabbit reticulocyte ribosome at 21 A resolution.哺乳动物核糖体RNA中扩展片段与80S核糖体精细结构的相关性;兔网织红细胞核糖体在21埃分辨率下的冷冻电子显微镜重建。
J Mol Biol. 1998 Jun 5;279(2):403-21. doi: 10.1006/jmbi.1998.1804.
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Interaction of rabbit reticulocyte ribosomes with bacteriophage f1 mRNA and of Escherichia coli ribosomes with rabbit globin mRNA.兔网织红细胞核糖体与噬菌体f1信使核糖核酸以及大肠杆菌核糖体与兔珠蛋白信使核糖核酸之间的相互作用。
Proc Natl Acad Sci U S A. 1977 Jul;74(7):2692-6. doi: 10.1073/pnas.74.7.2692.
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Characterization of Novel Ribosome-Associated Endoribonuclease SLFN14 from Rabbit Reticulocytes.兔网织红细胞中新的核糖体相关核糖核酸内切酶SLFN14的特性分析
Biochemistry. 2015 Jun 2;54(21):3286-301. doi: 10.1021/acs.biochem.5b00302. Epub 2015 May 21.
7
[Criteria of reticulocyte maturation. VI. Behavior of RNA reticulocyte and ribosome values in peripheral erythroid cell populations of different density during a bleeding anemia in rabbit].[网织红细胞成熟的标准。VI. 兔失血性贫血期间不同密度外周红细胞群体中RNA网织红细胞和核糖体值的变化]
Acta Biol Med Ger. 1973;31(6):781-94.
8
Two eukaryotic initiation factors (IF-I and IF-II) of protein synthesis that are required to form an initiation complex with rabbit reticulocyte ribosomes.两种蛋白质合成的真核起始因子(IF-I和IF-II),它们是与兔网织红细胞核糖体形成起始复合物所必需的。
Proc Natl Acad Sci U S A. 1974 Feb;71(2):436-40. doi: 10.1073/pnas.71.2.436.
9
A comparison of specific fragments produced by partial digestion of reticulocyte ribosomal RNA with pancreatic and T1 ribonuclease.用胰核糖核酸酶和T1核糖核酸酶对网织红细胞核糖体RNA进行部分酶解所产生的特定片段的比较。
Biochim Biophys Acta. 1966 Aug 17;123(2):441-4. doi: 10.1016/0005-2787(66)90302-9.
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[Degradation of ribosome RNA from rabbit reticulocytes by pancreas RNAase and reticulocyte enzymes].[胰腺核糖核酸酶和网织红细胞酶对兔网织红细胞核糖体核糖核酸的降解作用]
Folia Haematol Int Mag Klin Morphol Blutforsch. 1968;90(2):156-60.

引用本文的文献

1
Bacterial ribosome.细菌核糖体
Bacteriol Rev. 1970 Sep;34(3):228-77. doi: 10.1128/br.34.3.228-277.1970.
2
The effect of pancreatic ribonuclease on rabbit reticulocyte ribosomes and its interpretation in terms of ribosome structure.胰腺核糖核酸酶对兔网织红细胞核糖体的作用及其在核糖体结构方面的解释。
Biochem J. 1969 Oct;114(4):753-67. doi: 10.1042/bj1140753.
3
Asymmetry in the 50S ribosomal subunit of Escherichia coli.大肠杆菌50S核糖体亚基中的不对称性。
Proc Natl Acad Sci U S A. 1974 Jan;71(1):172-6. doi: 10.1073/pnas.71.1.172.
4
Spatial arrangement of ribosomal proteins: reaction of the Escherichia coli 30S subunit with bis-imidoesters.核糖体蛋白的空间排列:大肠杆菌30S亚基与双亚胺酯的反应
Proc Natl Acad Sci U S A. 1972 May;69(5):1327-31. doi: 10.1073/pnas.69.5.1327.
5
Primary sequence of the 16S ribosomal RNA of Escherichia coli.大肠杆菌16S核糖体RNA的一级序列。
Nucleic Acids Res. 1975 Feb;2(2):265-78. doi: 10.1093/nar/2.2.265.

本文引用的文献

1
SMALL-ANGLE X-RAY SCATTERING STUDIES OF RABBIT RETICULOCYTE RIBOSOMES USING A BERREMAN-TYPE POINT-FOCUSING MONOCHROMATOR.
J Ultrastruct Res. 1964 Oct;11:363-73. doi: 10.1016/s0022-5320(64)90039-5.
2
OCCURRENCE AND FUNCTION OF POLYSOMES IN RABBIT RETICULOCYTES.兔网织红细胞中多核糖体的出现与功能
J Mol Biol. 1964 Jul;9:154-67. doi: 10.1016/s0022-2836(64)80097-8.
3
AN ESTIMATE OF THE SIZE OF THE RIBOSOMAL SITE FOR MESSENGER RNA BINDING.信使核糖核酸结合的核糖体位点大小的估计
Proc Natl Acad Sci U S A. 1964 May;51(5):834-9. doi: 10.1073/pnas.51.5.834.
4
THE ISOLATION, CHARACTERIZATION AND ACID-BASE PROPERTIES OF RIBONUCLEIC ACID FROM RABBIT-RETICULOCYTE RIBOSOMES.兔网织红细胞核糖体核糖核酸的分离、特性鉴定及酸碱性质
Biochem J. 1963 Dec;89(3):574-84. doi: 10.1042/bj0890574.
5
SEDIMENTATION CONSTANT-MOLECULAR WEIGHT RELATION OF RIBOSOMES.核糖体的沉降常数与分子量的关系
Nature. 1963 Sep 28;199:1290-1. doi: 10.1038/1991290a0.
6
Ribosomes: a common structural feature.核糖体:一个共同的结构特征。
Science. 1963 May 31;140(3570):1000. doi: 10.1126/science.140.3570.1000.
7
The size and hydration of rabbit-reticulocyte ribosomes.兔网织红细胞核糖体的大小与水合作用
Biochim Biophys Acta. 1960 Jan 1;37:152-3. doi: 10.1016/0006-3002(60)90093-7.
8
The binding of magnesium to microsomal nucleoprotein and ribonucleic acid.镁与微粒体核蛋白及核糖核酸的结合。
Biochim Biophys Acta. 1960 Oct 7;43:393-403. doi: 10.1016/0006-3002(60)90464-9.
9
Structure of small viruses.小型病毒的结构
Nature. 1956 Mar 10;177(4506):473-5. doi: 10.1038/177473a0.
10
Nucleotide sequence of KB cell 5S RNA.KB细胞5S核糖核酸的核苷酸序列。
Science. 1967 Dec 29;158(3809):1695-9. doi: 10.1126/science.158.3809.1695.