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使用还原甲基化对核糖体构象变化进行的分析。

An analysis of alterations in ribosomal conformation using reductive methylation.

作者信息

Kisilevsky R, Weiler L, Treloar M

出版信息

J Biol Chem. 1978 Oct 10;253(19):7101-8.

PMID:567649
Abstract

Optimal conditions for reductive alkylation of ribosomal proteins in their native and denatured states were examined. The relative accessibility of rat liver ribosomal proteins to reductive alkylation was then examined. Intact ribosomes were firs labeled with [14C]formaldehyde and NaBH4. The proteins were then separated from RNA, denatured in 6 M guanidine, and labeled again using formaldehyde and NaB3H4. The relative accessibility of individual proteins to labeling in the intact state could thus be determined from their 3H/14C ratios following separation by two-dimensional electrophoresis. The results suggest that proteins S6, S11, S26, L3, and L35 are less accessible to labeling while proteins S1, S15, L11, L12, L16, and L24 appear relatively more accessible. The accessibility of individual proteins in ribosomes in different conformational states were then compared. The results indicated that S3, L7, and L36 are likely to be involved in a structural difference when normal polysomes and normal monomers are compared. Also, that S26 and L35, and probably S3, S20, L7, L8, L24, L27, L28 and L34 appear to be involved in a ribosomal conformation change induced by ethionine intoxication.

摘要

研究了核糖体蛋白在天然状态和变性状态下进行还原烷基化的最佳条件。随后检测了大鼠肝脏核糖体蛋白对还原烷基化的相对可及性。完整核糖体首先用[14C]甲醛和硼氢化钠进行标记。然后将蛋白质与RNA分离,在6M胍中变性,再用甲醛和硼氢化三钠再次标记。通过二维电泳分离后,根据各蛋白质的3H/14C比值,即可确定完整状态下单个蛋白质对标记的相对可及性。结果表明,蛋白质S6、S11、S26、L3和L35较难被标记,而蛋白质S1、S15、L11、L12、L16和L24相对更容易被标记。随后比较了处于不同构象状态的核糖体中单个蛋白质的可及性。结果表明,当比较正常多核糖体和正常单体时,S3、L7和L36可能与结构差异有关。此外,S26和L35,可能还有S3、S20、L7、L8、L24、L27、L28和L34似乎与乙硫氨酸中毒诱导的核糖体构象变化有关。

相似文献

1
An analysis of alterations in ribosomal conformation using reductive methylation.使用还原甲基化对核糖体构象变化进行的分析。
J Biol Chem. 1978 Oct 10;253(19):7101-8.
2
Ribosome topography in baby hamster kidney cells infected with Sindbis and vesicular stomatitis viruses.
Biochim Biophys Acta. 1983 Nov 17;741(2):258-68. doi: 10.1016/0167-4781(83)90067-2.
3
Ribosome conformational changes associated with protein S6 phosphorylation.与蛋白质S6磷酸化相关的核糖体构象变化。
J Biol Chem. 1984 Jan 25;259(2):1351-6.
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Localization of ribosomal proteins on the surface of mammalian 60S ribosomal subunits by means of immobilized enzymes. Correlation with chemical cross-linking data.利用固定化酶对核糖体蛋白在哺乳动物60S核糖体亚基表面进行定位。与化学交联数据的相关性。
Biochem Biophys Res Commun. 1987 Dec 31;149(3):1077-83. doi: 10.1016/0006-291x(87)90518-3.
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Isolation of eukaryotic ribosomal proteins. Purification and characterization of 60 S ribosomal subunit proteins L3, L6, L7', L8, L10, L15, L17, L18, L19, L23', L25, L27', L28, L29, L31, L32, L34, L35, L36, L36', and L37'.真核生物核糖体蛋白的分离。60S核糖体亚基蛋白L3、L6、L7'、L8、L10、L15、L17、L18、L19、L23'、L25、L27'、L28、L29、L31、L32、L34、L35、L36、L36'和L37'的纯化与特性分析。
J Biol Chem. 1977 Jun 10;252(11):3961-9.
6
Identification of neighboring protein pairs in rat liver 60S ribosomal subunits cross-linked with dimethyl suberimidate or dimethyl 3,3'-dithiobispropionimidate.用辛二亚氨酸二甲酯或二甲基3,3'-二硫代双丙亚氨酸酯交联的大鼠肝脏60S核糖体亚基中相邻蛋白质对的鉴定
J Biochem. 1980 Oct;88(4):1033-44. doi: 10.1093/oxfordjournals.jbchem.a133054.
7
Reductive alkylation of mammalian ribosomes.哺乳动物核糖体的还原烷基化作用。
Biochim Biophys Acta. 1977 Feb 16;474(4):578-87. doi: 10.1016/0005-2787(77)90077-6.
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Subcellular distribution of ribosomal proteins in Dictyostelium discoideum.盘基网柄菌核糖体蛋白的亚细胞分布
Biochem Cell Biol. 1990 May;68(5):838-45.
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[Study of the surface of Escherichia coli ribosomes and ribosomal particles by the tritium bombardment method].[用氚轰击法研究大肠杆菌核糖体及核糖体颗粒的表面]
Biokhimiia. 1986 Nov;51(11):1858-67.
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Are there proteins between the ribosomal subunits? Hot tritium bombardment experiments.核糖体亚基之间存在蛋白质吗?热氚轰击实验。
FEBS Lett. 1986 Mar 3;197(1-2):229-33. doi: 10.1016/0014-5793(86)80332-5.

引用本文的文献

1
Molecular aspects of the in vivo and in vitro effects of ethionine, an analog of methionine.蛋氨酸类似物乙硫氨酸在体内和体外作用的分子层面研究
Microbiol Rev. 1982 Sep;46(3):281-95. doi: 10.1128/mr.46.3.281-295.1982.
2
Hormone-induced protein phosphorylation. III. regulation of the phosphorylation of the secretagogue-responsive 29,000-dalton protein by both Ca2+ and cAMP in vitro.激素诱导的蛋白质磷酸化。III. 体外Ca2+和cAMP对促分泌素反应性29000道尔顿蛋白质磷酸化的调节。
J Cell Biol. 1982 Dec;95(3):918-23. doi: 10.1083/jcb.95.3.918.