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DNA的天然超螺旋:大肠杆菌中DNA促旋酶和ω蛋白的作用

Native supercoiling of DNA: the effects of DNA gyrase and omega protein in E. coli.

作者信息

Mirkin S M, Zaitsev E N, Panyutin I G, Lyamichev V I

出版信息

Mol Gen Genet. 1984;196(3):508-12. doi: 10.1007/BF00436200.

DOI:10.1007/BF00436200
PMID:6094979
Abstract

This study deals with the effects of a temperature-sensitive (ts) mutation at the gene encoding the DNA gyrase B subunit (gyrBts) and a deletion of the top gene encoding the omega protein upon the superhelical density of the pAO3 plasmid in E. coli cells. The alteration of the DNA gyrase B subunit is shown to lead to a partial relaxation of DNA. On the other hand, the lack of omega protein due to the top gene deletion leads to an abnormally high degree of DNA supercoiling. In a double gyrBts delta top mutant the DNA supercoiling is greater than native at the permissive temperature, while under nonpermissive conditions a partial relaxation is observed. However, the pattern of DNA relaxation in the latter case is quite different from that in a single gyrBts mutant. The conclusion is that the native supercoiling of DNA in the cell is maintained through the counter-activities of DNA gyrase and the omega protein.

摘要

本研究探讨了编码DNA回旋酶B亚基的基因(gyrBts)上的温度敏感(ts)突变以及编码ω蛋白的top基因缺失对大肠杆菌细胞中pAO3质粒超螺旋密度的影响。结果表明,DNA回旋酶B亚基的改变会导致DNA部分松弛。另一方面,由于top基因缺失导致的ω蛋白缺乏会导致DNA超螺旋程度异常高。在双gyrBts delta top突变体中,在允许温度下DNA超螺旋大于天然状态,而在非允许条件下观察到部分松弛。然而,后一种情况下的DNA松弛模式与单gyrBts突变体中的模式有很大不同。结论是,细胞中DNA原本的超螺旋状态是通过DNA回旋酶和ω蛋白的相反作用来维持的。

相似文献

1
Native supercoiling of DNA: the effects of DNA gyrase and omega protein in E. coli.DNA的天然超螺旋:大肠杆菌中DNA促旋酶和ω蛋白的作用
Mol Gen Genet. 1984;196(3):508-12. doi: 10.1007/BF00436200.
2
Escherichia coli DNA topoisomerase I mutants: increased supercoiling is corrected by mutations near gyrase genes.大肠杆菌DNA拓扑异构酶I突变体:超螺旋增加可通过gyrase基因附近的突变得到纠正。
Cell. 1982 Nov;31(1):35-42. doi: 10.1016/0092-8674(82)90402-0.
3
[Temperature-sensitive mutant Escherichia coli for the B-subunit of DNA-gyrase. The effect on replication and transcription].[DNA促旋酶B亚基的温度敏感型突变大肠杆菌。对复制和转录的影响]
Genetika. 1983 Mar;19(3):425-34.
4
Regulation of DNA supercoiling in Escherichia coli: genetic basis of a compensatory mutation in DNA gyrase.大肠杆菌中DNA超螺旋的调控:DNA回旋酶补偿性突变的遗传基础。
FEBS Lett. 1989 Aug 14;253(1-2):67-70. doi: 10.1016/0014-5793(89)80931-7.
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Expression in Escherichia coli of Y5 mutant and N-terminal domain-deleted DNA gyrase B proteins affects strongly plasmid maintenance.Y5突变体和N端结构域缺失的DNA促旋酶B蛋白在大肠杆菌中的表达强烈影响质粒的维持。
Plasmid. 1998;39(1):21-34. doi: 10.1006/plas.1997.1322.
6
DNA replication and transcription in a temperature-sensitive mutant of E. coli with a defective DNA gyrase B subunit.大肠杆菌DNA解旋酶B亚基缺陷的温度敏感突变体中的DNA复制与转录
Mol Gen Genet. 1982;188(1):91-5. doi: 10.1007/BF00332999.
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Gyrase inhibitors can increase gyrA expression and DNA supercoiling.回旋酶抑制剂可增加gyrA表达和DNA超螺旋化。
J Bacteriol. 1989 Dec;171(12):6573-9. doi: 10.1128/jb.171.12.6573-6579.1989.
8
An Escherichia coli DNA topoisomerase I mutant has a compensatory mutation that alters two residues between functional domains of the DNA gyrase A protein.一种大肠杆菌DNA拓扑异构酶I突变体具有一个补偿性突变,该突变改变了DNA促旋酶A蛋白功能域之间的两个氨基酸残基。
J Bacteriol. 1992 Jun;174(12):4175-8. doi: 10.1128/jb.174.12.4175-4178.1992.
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Changed properties of the A subunit in DNA gyrase with a B subunit mutation.具有B亚基突变的DNA促旋酶中A亚基的特性变化
Mol Gen Genet. 1982;186(4):572-4. doi: 10.1007/BF00337967.
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Expression in Escherichia coli of Y5-mutant and N-terminal domain-deleted DNA gyrase B proteins affects strongly plasmid maintenance.Y5突变体和N端结构域缺失的DNA促旋酶B蛋白在大肠杆菌中的表达对质粒维持有强烈影响。
Plasmid. 1997;38(3):188-201. doi: 10.1006/plas.1997.1313.

引用本文的文献

1
Telling Your Right Hand from Your Left: The Effects of DNA Supercoil Handedness on the Actions of Type II Topoisomerases.辨别左右手:DNA 超螺旋手性对 II 型拓扑异构酶作用的影响。
Int J Mol Sci. 2023 Jul 7;24(13):11199. doi: 10.3390/ijms241311199.
2
Effect of DNA superhelicity on transcription termination.DNA超螺旋对转录终止的影响。
Mol Gen Genet. 1987 May;207(2-3):430-4. doi: 10.1007/BF00331611.
3
Effects of DNA gyrase inhibitors in Escherichia coli topoisomerase I mutants.DNA 回旋酶抑制剂对大肠杆菌拓扑异构酶 I 突变体的影响。

本文引用的文献

1
Evidence of cruciform structures in superhelical DNA provided by two-dimensional gel electrophoresis.二维凝胶电泳提供的超螺旋DNA中十字形结构的证据。
FEBS Lett. 1983 Mar 21;153(2):298-302. doi: 10.1016/0014-5793(83)80628-0.
2
Escherichia coli type-1 topoisomerases: identification, mechanism, and role in recombination.大肠杆菌1型拓扑异构酶:鉴定、机制及其在重组中的作用。
Cold Spring Harb Symp Quant Biol. 1983;47 Pt 2:769-77. doi: 10.1101/sqb.1983.047.01.088.
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Escherichia coli DNA topoisomerase I mutants have compensatory mutations in DNA gyrase genes.
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DNA supercoiling and suppression of the leu-500 promoter mutation.DNA超螺旋与亮氨酸-500启动子突变的抑制
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A physiological role for DNA supercoiling in the anaerobic regulation of colicin gene expression.DNA超螺旋在大肠杆菌素基因表达的厌氧调节中的生理作用。
Mol Gen Genet. 1991 Feb;225(2):342-5. doi: 10.1007/BF00269868.
大肠杆菌DNA拓扑异构酶I突变体在DNA促旋酶基因中存在补偿性突变。
Cell. 1982 Nov;31(1):43-51. doi: 10.1016/0092-8674(82)90403-2.
4
Escherichia coli DNA topoisomerase I mutants: increased supercoiling is corrected by mutations near gyrase genes.大肠杆菌DNA拓扑异构酶I突变体:超螺旋增加可通过gyrase基因附近的突变得到纠正。
Cell. 1982 Nov;31(1):35-42. doi: 10.1016/0092-8674(82)90402-0.
5
A sharp structural transition in pA03 plasmid DNA caused by increased superhelix density.
FEBS Lett. 1982 Nov 8;148(2):297-301. doi: 10.1016/0014-5793(82)80828-4.
6
DNA replication and transcription in a temperature-sensitive mutant of E. coli with a defective DNA gyrase B subunit.大肠杆菌DNA解旋酶B亚基缺陷的温度敏感突变体中的DNA复制与转录
Mol Gen Genet. 1982;188(1):91-5. doi: 10.1007/BF00332999.
7
A rapid boiling method for the preparation of bacterial plasmids.一种制备细菌质粒的快速煮沸法。
Anal Biochem. 1981 Jun;114(1):193-7. doi: 10.1016/0003-2697(81)90473-5.
8
Mutations in the gene coding for Escherichia coli DNA topoisomerase I affect transcription and transposition.编码大肠杆菌DNA拓扑异构酶I的基因发生突变会影响转录和转座。
Proc Natl Acad Sci U S A. 1981 May;78(5):2747-51. doi: 10.1073/pnas.78.5.2747.
9
Identification and localization of a gene that specifies production of Escherichia coli DNA topoisomerase I.鉴定并定位一个决定大肠杆菌DNA拓扑异构酶I产生的基因。
Proc Natl Acad Sci U S A. 1981 Apr;78(4):2164-8. doi: 10.1073/pnas.78.4.2164.
10
[Influence of DNA superhelicity on the major genetic processes in prokaryotes].[DNA超螺旋对原核生物主要遗传过程的影响]
Mol Biol (Mosk). 1980;14(1):8-34.