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短杆菌肽A通道:对其通透性特征的综述,特别提及转运的单排方面。

The gramicidin A channel: a review of its permeability characteristics with special reference to the single-file aspect of transport.

作者信息

Finkelstein A, Andersen O S

出版信息

J Membr Biol. 1981 Apr 30;59(3):155-71. doi: 10.1007/BF01875422.

DOI:10.1007/BF01875422
PMID:6165825
Abstract

Gramicidin A forms univalent cation-selective channels of approximately 4 A diameter in phospholipid bilayer membranes. The transport of ions and water throughout most of the channel length is by a single-file process; that is, cations and water molecules cannot pass each other within the channel. The implications of this single-file mode of transport for ion movement are considered. In particular, we show that there is no significant electrostatic barrier to ion movement between the energy wells at the two ends of the channel. The rate of ion translocation (e.g., Na+ or Cs+) through the channel between these wells is limited by the necessity for an ion to move six water molecules in single file along with it; this also limits the maximum possible value for channel conductance. At all attainable concentrations of NaCl, the gramicidin A channel never contains more than one sodium ion, whereas even at 0.1 M CsCl, some channels contain two cesium ions. There is no necessity to postulate more than two ion-binding sites in the channel or occupancy of the channel by more than two ions at any time.

摘要

短杆菌肽A在磷脂双分子层膜中形成直径约为4埃的单价阳离子选择性通道。在通道的大部分长度范围内,离子和水的运输是通过单排过程进行的;也就是说,阳离子和水分子在通道内不能相互通过。本文考虑了这种单排运输模式对离子移动的影响。特别是,我们表明,在通道两端的能量阱之间,离子移动不存在显著的静电势垒。离子(如Na+或Cs+)在这些阱之间通过通道的转运速率受到离子必须携带六个水分子单排移动的限制;这也限制了通道电导的最大可能值。在所有可达到的NaCl浓度下,短杆菌肽A通道中钠离子的数量从不超过一个,而即使在0.1M CsCl溶液中,一些通道中也含有两个铯离子。无需假设通道中存在超过两个离子结合位点,也无需假设通道在任何时候被超过两个离子占据。

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1
The gramicidin A channel: a review of its permeability characteristics with special reference to the single-file aspect of transport.短杆菌肽A通道:对其通透性特征的综述,特别提及转运的单排方面。
J Membr Biol. 1981 Apr 30;59(3):155-71. doi: 10.1007/BF01875422.
2
Open channel noise. V. Fluctuating barriers to ion entry in gramicidin A channels.开放通道噪声。V. 短杆菌肽A通道中离子进入的波动屏障。
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3
Structure and dynamics of ion transport through gramicidin A.离子通过短杆菌肽A的转运结构与动力学
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Why is gramicidin valence selective? A theoretical study.短杆菌肽为何具有价态选择性?一项理论研究。
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Gramicidin channels.短杆菌肽通道
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本文引用的文献

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The effects of macrocyclic compounds on cation transport in sheep red cells and thin and thick lipid membranes.大环化合物对绵羊红细胞以及薄脂质膜和厚脂质膜中阳离子转运的影响。
J Gen Physiol. 1968 May 1;51(5):373-84.
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The potassium permeability of a giant nerve fibre.巨神经纤维的钾通透性。
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GRAMICIDIN A. VI. THE SYNTHESIS OF VALINE- AND ISOLEUCINE-GRAMICIDIN A.短杆菌肽A。六、缬氨酸 - 和异亮氨酸 - 短杆菌肽A的合成。
微生物组衍生的抗菌lugdunin 与宿主肽协同作用充当阳离子载体。
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Mechanistic basis for potassium efflux-driven activation of the human NLRP1 inflammasome.钾离子外流驱动的人源 NLRP1 炎症小体激活的机制基础。
Proc Natl Acad Sci U S A. 2024 Jan 9;121(2):e2309579121. doi: 10.1073/pnas.2309579121. Epub 2024 Jan 4.
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Lipid-Centric Approaches in Combating Infectious Diseases: Antibacterials, Antifungals and Antivirals with Lipid-Associated Mechanisms of Action.以脂质为中心的传染病防治方法:具有脂质相关作用机制的抗菌、抗真菌和抗病毒药物。
Antibiotics (Basel). 2023 Dec 11;12(12):1716. doi: 10.3390/antibiotics12121716.
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Enhancing the Antimicrobial Properties of Peptides through Cell-Penetrating Peptide Conjugation: A Comprehensive Assessment.通过细胞穿透肽缀合增强肽的抗菌性能:全面评估。
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Modulation of the Dipole Potential of Model Lipid Membranes with Phytochemicals: Molecular Mechanisms, Structure-Activity Relationships, and Implications in Reconstituted Ion Channels.植物化学物质对模型脂质膜偶极电位的调节:分子机制、构效关系及其在重组离子通道中的意义
Membranes (Basel). 2023 Apr 21;13(4):453. doi: 10.3390/membranes13040453.
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Chromone-Containing Allylmorpholines Influence Ion Channels in Lipid Membranes via Dipole Potential and Packing Stress.含色酮的烯丙基吗啉通过偶极势和堆积应力影响脂质膜中的离子通道。
Int J Mol Sci. 2022 Sep 30;23(19):11554. doi: 10.3390/ijms231911554.
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DNA-Based Optical Quantification of Ion Transport across Giant Vesicles.基于 DNA 的巨囊离子传输光学定量分析。
ACS Nano. 2022 Oct 25;16(10):17128-17138. doi: 10.1021/acsnano.2c07496. Epub 2022 Oct 12.
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Phosphodiesterase Type 5 Inhibitors Greatly Affect Physicochemical Properties of Model Lipid Membranes.5型磷酸二酯酶抑制剂对模型脂质膜的物理化学性质有很大影响。
Membranes (Basel). 2021 Nov 19;11(11):893. doi: 10.3390/membranes11110893.
J Am Chem Soc. 1965 May 5;87:2020-7. doi: 10.1021/ja01087a028.
4
GRAMICIDIN A. V. THE STRUCTURE OF VALINE- AND ISOLEUCINE-GRAMICIDIN A.短杆菌肽A。五、缬氨酸 - 和异亮氨酸 - 短杆菌肽A的结构
J Am Chem Soc. 1965 May 5;87:2011-20. doi: 10.1021/ja01087a027.
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Growth of the concept of the paucimolecular membrane.寡分子膜概念的发展。
Circulation. 1962 Nov;26:1022-37. doi: 10.1161/01.cir.26.5.1022.
6
Ion movement through gramicidin A channels. On the importance of the aqueous diffusion resistance and ion-water interactions.离子通过短杆菌肽A通道的运动。论水相扩散阻力和离子-水相互作用的重要性。
Acta Physiol Scand Suppl. 1980;481:27-35.
7
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Biochim Biophys Acta. 1980 Nov 4;602(2):331-54. doi: 10.1016/0005-2736(80)90316-8.
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Rate theory calculation of gramicidin single-channel currents using NMR-derived rate constants.使用核磁共振衍生速率常数对短杆菌肽单通道电流进行速率理论计算。
Proc Natl Acad Sci U S A. 1980 Apr;77(4):2028-32. doi: 10.1073/pnas.77.4.2028.
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Development of K+-Na+ discrimination in experimental bimolecular lipid membranes by macrocyclic antibiotics.大环抗生素对实验性双分子脂质膜中钾离子 - 钠离子选择性的影响
Biochem Biophys Res Commun. 1967 Feb 21;26(4):398-404. doi: 10.1016/0006-291x(67)90559-1.
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The gramicidin A transmembrane channel: a proposed pi(L,D) helix.短杆菌肽A跨膜通道:一种推测的π(L,D)螺旋
Proc Natl Acad Sci U S A. 1971 Mar;68(3):672-6. doi: 10.1073/pnas.68.3.672.