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通过单步RNA分离程序检测细菌中高水平的含聚腺苷酸RNA。

Detection of high levels of polyadenylate-containing RNA in bacteria by the use of a single-step RNA isolation procedure.

作者信息

Gopalakrishna Y, Langley D, Sarkar N

出版信息

Nucleic Acids Res. 1981 Jul 24;9(14):3545-54. doi: 10.1093/nar/9.14.3545.

DOI:10.1093/nar/9.14.3545
PMID:6169008
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC327370/
Abstract

A new one-step procedure for the isolation of bacterial RNA, involving lysis by proteinase K in the presence of sodium dodecyl sulfate, is described. Pulse-labeled RNA isolated by this procedure for Bacillus brevis, Bacillus subtilis, and Escherichia coli B has been found to contain a substantial fraction (15-40%) of polyadenylated RNA as determined by adsorption to oligo(dT)-cellulose. This contrasts with RNA isolated by procedures involving phenol extraction, a process which appears to lead to the selective loss of polyadenylated RNA. The presence of polyadenylated RNA in E. coli was confirmed by an independent method which involved hybridization with [3H]polyuridylic acid. Using the proteinase K method for RNA isolation, it was possible to demonstrate the in vitro synthesis of polyadenylated RNA by toluene-treated cells of B. brevis, B. subtilis, and E. coli.

摘要

本文描述了一种新的一步法分离细菌RNA的方法,该方法是在十二烷基硫酸钠存在下用蛋白酶K进行裂解。通过该方法分离得到的经脉冲标记的短短芽孢杆菌、枯草芽孢杆菌和大肠杆菌B的RNA,经寡聚(dT)-纤维素吸附测定,发现其中含有相当一部分(15%-40%)的聚腺苷酸化RNA。这与通过苯酚提取法分离的RNA形成对比,苯酚提取法似乎会导致聚腺苷酸化RNA的选择性丢失。通过与[3H]聚尿苷酸杂交的独立方法证实了大肠杆菌中聚腺苷酸化RNA的存在。使用蛋白酶K法分离RNA,可以证明经甲苯处理的短短芽孢杆菌、枯草芽孢杆菌和大肠杆菌细胞能够体外合成聚腺苷酸化RNA。

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本文引用的文献

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HOST SPECIFICITY OF DNA PRODUCED BY ESCHERICHIA COLI V . THE ROLE OF METHIONINE IN THE PRODUCTION OF HOST SPECIFICITY.大肠杆菌产生的DNA的宿主特异性V. 甲硫氨酸在宿主特异性产生中的作用
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Measurement of polyadenylic acid by hybridization with polyuridylic acid: a source of error due to the lability of tritiated polyuridylic acid in trichloroacetic acid.通过与聚尿苷酸杂交来测定聚腺苷酸:由于氚标记的聚尿苷酸在三氯乙酸中不稳定而导致的误差来源。
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Loss of the polyadenylate segment from mammalian messenger RNA. Selective cleavage of this sequence from polyribosomes.哺乳动物信使核糖核酸多聚腺苷酸片段的缺失。该序列从多核糖体上的选择性切割。
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5
Could poly(A) align the splicing sites of messenger RNA precursors?聚腺苷酸(poly(A))能否使信使核糖核酸前体的剪接位点对齐?
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Biochem Biophys Res Commun. 1980 Mar 13;93(1):201-8. doi: 10.1016/s0006-291x(80)80266-x.
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Polyadenylic acid sequences in the heterogeneous nuclear RNA and rapidly-labeled polyribosomal RNA of HeLa cells: possible evidence for a precursor relationship.海拉细胞异质性核RNA和快速标记的多核糖体RNA中的聚腺苷酸序列:前体关系的可能证据。
Proc Natl Acad Sci U S A. 1971 Jun;68(6):1336-40. doi: 10.1073/pnas.68.6.1336.
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A polynucleotide segment rich in adenylic acid in the rapidly-labeled polyribosomal RNA component of mouse sarcoma 180 ascites cells.在小鼠肉瘤180腹水细胞快速标记的多核糖体RNA组分中富含腺苷酸的多核苷酸片段。
Proc Natl Acad Sci U S A. 1971 Jun;68(6):1331-5. doi: 10.1073/pnas.68.6.1331.
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An adenylic acid-rich sequence in messenger RNA of HeLa cells and its possible relationship to reiterated sites in DNA.海拉细胞信使核糖核酸中富含腺苷酸的序列及其与DNA中重复位点的可能关系。
Proc Natl Acad Sci U S A. 1971 Jun;68(6):1321-5. doi: 10.1073/pnas.68.6.1321.
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