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克隆的虹鳟鱼鱼精蛋白基因体内转录本5'末端的定位

The localisation of the 5'-termini of in vivo transcripts of a cloned rainbow trout protamine gene.

作者信息

Gregory S P, Dillon N O, Butterworth P H

出版信息

Nucleic Acids Res. 1982 Dec 11;10(23):7581-92. doi: 10.1093/nar/10.23.7581.

DOI:10.1093/nar/10.23.7581
PMID:6185924
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC327031/
Abstract

The mRNA start site of a cloned rainbow trout protamine gene (TPG-3) has been localised using S1-nuclease mapping and primer extension of in vivo synthesised trout testis poly A+-RNA. The presumptive cap site occurs within an AT-rich region, only 14 nucleotides from the start of the protein-coding sequence. Transcription of this protamine gene in vitro, using the Hela whole-cell extract system, generates products initiated at the same nucleotide as that used in vivo. In vitro transcription is abolished by deletion of sequences between -20 and -48, within which is a canonical TATA-box having an llbp homology with the strong chick conalbumin and Adenovirus-2 major late promoters (CTATAAAAGGG).

摘要

利用S1核酸酶图谱分析和体内合成的虹鳟鱼睾丸聚腺苷酸加尾RNA的引物延伸法,已确定了克隆的虹鳟鱼鱼精蛋白基因(TPG - 3)的mRNA起始位点。推定的帽位点位于富含AT的区域内,距离蛋白质编码序列起始处仅14个核苷酸。使用Hela全细胞提取物系统在体外转录该鱼精蛋白基因,产生的产物起始于与体内相同的核苷酸。通过缺失-20至-48之间的序列可消除体外转录,该区域内有一个典型的TATA框,与强的鸡伴清蛋白和腺病毒2型主要晚期启动子(CTATAAAAGGG)具有11bp的同源性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d3b/327031/8ef0d31ade8d/nar00392-0134-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d3b/327031/973807c3ca82/nar00392-0131-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d3b/327031/458e4f8d7aed/nar00392-0132-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d3b/327031/c317b1e2deba/nar00392-0133-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d3b/327031/8ef0d31ade8d/nar00392-0134-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d3b/327031/973807c3ca82/nar00392-0131-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d3b/327031/458e4f8d7aed/nar00392-0132-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d3b/327031/c317b1e2deba/nar00392-0133-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d3b/327031/8ef0d31ade8d/nar00392-0134-a.jpg

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引用本文的文献

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Oxalurate induction of multiple URA3 transcripts in Saccharomyces cerevisiae.

本文引用的文献

1
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Nature. 1980 May 15;285(5761):147-51. doi: 10.1038/285147a0.
2
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J Biochem. 1981 Jun;89(6):1863-8. doi: 10.1093/oxfordjournals.jbchem.a133388.
3
Studies on the heterogeneity of the 5' ends of the protamine mRNAs from rainbow trout testis.虹鳟鱼睾丸中鱼精蛋白mRNA 5'端异质性的研究。
草尿酸盐诱导酿酒酵母中多个URA3转录本的产生。
Mol Cell Biol. 1983 Nov;3(11):1889-97. doi: 10.1128/mcb.3.11.1889-1897.1983.
4
Transcription of a cloned rainbow trout protamine gene is accurately initiated following transfection into HeLa cells but the majority of the transcripts fail to polyadenylate at the correct site.克隆的虹鳟鱼鱼精蛋白基因转染到HeLa细胞后转录能准确起始,但大多数转录本未能在正确位点进行多聚腺苷酸化。
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5
The effect of changing the distance between the TATA-box and cap site by up to three base pairs on the selection of the transcriptional start site of a cloned eukaryotic gene in vitro and in vivo.在体外和体内,将TATA框与帽位点之间的距离改变多达三个碱基对,对克隆的真核基因转录起始位点选择的影响。
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6
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J Mol Evol. 1988;27(1):8-16. doi: 10.1007/BF02099725.
7
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Nucleic Acids Res. 1987 Apr 24;15(8):3385-96. doi: 10.1093/nar/15.8.3385.
Biosci Rep. 1981 Jan;1(1):61-70. doi: 10.1007/BF01115150.
4
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Biochemistry. 1981 Mar 3;20(5):1216-23. doi: 10.1021/bi00508a025.
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