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SalGI限制性内切核酸酶。DNA切割机制。

The SalGI restriction endonuclease. Mechanism of DNA cleavage.

作者信息

Maxwell A, Halford S E

出版信息

Biochem J. 1982 Apr 1;203(1):85-92. doi: 10.1042/bj2030085.

DOI:10.1042/bj2030085
PMID:6285899
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1158196/
Abstract

The cleavage of supercoiled DNA of plasmid pMB9 by restriction endonuclease SalGI has been studied. Under the optimal conditions for this reaction, the only product is the linear form of the DNA, in which both strands of the duplex have been cleaved at the SalGI recognition site. DNA molecules cleaved in one strand at this site were found to be poor substrates for the SalGI enzyme. Thus, both strands of the DNA appear to be cleaved in a concerted reaction. However, under other conditions, the enzyme cleaves either one or both strands of the DNA; the supercoiled substrate is then converted to either open-circle or linear forms, the two being produced simultaneously rather than consecutively. We propose a mechanism for the SalGI restriction endonuclease which accounts for the reactions of this enzyme under both optimal and other conditions. These reactions were unaffected by the tertiary structure of the DNA.

摘要

对限制性内切酶SalGI切割质粒pMB9的超螺旋DNA进行了研究。在该反应的最佳条件下,唯一的产物是DNA的线性形式,其中双链的两条链均在SalGI识别位点处被切割。发现在该位点单链被切割的DNA分子是SalGI酶的不良底物。因此,DNA的两条链似乎是在协同反应中被切割的。然而,在其他条件下,该酶会切割DNA的一条链或两条链;然后超螺旋底物会转化为开环或线性形式,这两种形式是同时产生而非相继产生的。我们提出了一种SalGI限制性内切酶的作用机制,该机制解释了该酶在最佳条件和其他条件下的反应。这些反应不受DNA三级结构的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd9c/1158196/c3763ec712a0/biochemj00378-0092-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd9c/1158196/8cf40c670666/biochemj00378-0091-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd9c/1158196/c3763ec712a0/biochemj00378-0092-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd9c/1158196/8cf40c670666/biochemj00378-0091-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd9c/1158196/c3763ec712a0/biochemj00378-0092-a.jpg

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本文引用的文献

1
The SalGI restriction endonuclease. Enzyme specificity.SalGI限制性核酸内切酶。酶的特异性。
Biochem J. 1982 Apr 1;203(1):93-8. doi: 10.1042/bj2030093.
2
The SalGI restriction endonuclease. Purification and properties.SalGI限制性内切核酸酶。纯化及特性
Biochem J. 1982 Apr 1;203(1):77-84. doi: 10.1042/bj2030077.
3
The EcoRI restriction endonuclease, covalently closed DNA and ethidium bromide.EcoRI 限制性内切酶、共价闭合 DNA 和溴化乙锭。
BspRI 限制内切酶:克隆、在大肠杆菌中的表达及连续切割机制。
Nucleic Acids Res. 2010 Nov;38(20):7155-66. doi: 10.1093/nar/gkq567. Epub 2010 Jun 29.
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Single turnovers of the EcoRI restriction endonuclease.EcoRI 限制性内切酶的单轮反应。
Biochem J. 1983 May 1;211(2):405-15. doi: 10.1042/bj2110405.
5
The SalGI restriction endonuclease. Enzyme specificity.SalGI限制性核酸内切酶。酶的特异性。
Biochem J. 1982 Apr 1;203(1):93-8. doi: 10.1042/bj2030093.
6
The SalGI restriction endonuclease. Purification and properties.SalGI限制性内切核酸酶。纯化及特性
Biochem J. 1982 Apr 1;203(1):77-84. doi: 10.1042/bj2030077.
7
Hydrolysis by restriction endonucleases at their DNA recognition sequences substituted with mismatched base pairs.限制性内切核酸酶在其被错配碱基对取代的DNA识别序列处进行水解。
Nucleic Acids Res. 1986 Jun 11;14(11):4407-20.
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Interaction of EcoRII restriction and modification enzymes with synthetic DNA fragments. V. Study of single-strand cleavages.EcoRII限制酶与修饰酶与合成DNA片段的相互作用。V. 单链切割研究。
Nucleic Acids Res. 1985 Dec 20;13(24):8969-81. doi: 10.1093/nar/13.24.8969.
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The use of phosphorothioate-modified DNA in restriction enzyme reactions to prepare nicked DNA.在限制性内切酶反应中使用硫代磷酸酯修饰的DNA来制备带切口的DNA。
Nucleic Acids Res. 1985 Dec 20;13(24):8749-64. doi: 10.1093/nar/13.24.8749.
10
An exocytoplasmic endonuclease with restriction function in Streptomyces antibioticus.天蓝色链霉菌中一种具有限制功能的胞外核酸内切酶。
J Bacteriol. 1988 Mar;170(3):1339-45. doi: 10.1128/jb.170.3.1339-1345.1988.
Biochem J. 1981 Dec 1;199(3):767-77. doi: 10.1042/bj1990767.
4
The EcoRI restriction endonuclease with bacteriophage lambda DNA. Kinetic studies.用噬菌体λDNA对EcoRI限制性内切核酸酶进行的动力学研究。
Biochem J. 1980 Nov 1;191(2):581-92. doi: 10.1042/bj1910581.
5
A restriction enzyme from Hemophilus influenzae. II.一种来自流感嗜血杆菌的限制性内切酶。II.
J Mol Biol. 1970 Jul 28;51(2):393-409. doi: 10.1016/0022-2836(70)90150-6.
6
A restriction enzyme from Hemophilus influenzae. I. Purification and general properties.一种来自流感嗜血杆菌的限制性内切酶。I. 纯化及一般特性。
J Mol Biol. 1970 Jul 28;51(2):379-91. doi: 10.1016/0022-2836(70)90149-x.
7
Site-directed mutagenesis in DNA: generation of point mutations in cloned beta globin complementary dna at the positions corresponding to amino acids 121 to 123.DNA中的定点诱变:在克隆的β珠蛋白互补DNA中对应于氨基酸121至123的位置产生点突变。
J Mol Biol. 1978 Sep 15;124(2):343-58. doi: 10.1016/0022-2836(78)90303-0.
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9
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