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卡尔斯伯酵母rRNA操纵子转录的体内和体外起始位点。

The in vivo and in vitro initiation site for transcription of the rRNA operon of Saccharomyces carlsbergensis.

作者信息

Klootwijk J, Verbeet M P, Veldman G M, de Regt V C, van Heerikhuizen H, Bogerd J, Planta R J

出版信息

Nucleic Acids Res. 1984 Feb 10;12(3):1377-90. doi: 10.1093/nar/12.3.1377.

DOI:10.1093/nar/12.3.1377
PMID:6322105
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC318583/
Abstract

We have performed a detailed analysis of the transcription initiation of the rRNA operon in the yeast Saccharomyces carlsbergensis. Electron microscopic analysis of R-looped pre-rRNA molecules together with a very sensitive S1-nuclease mapping showed the use of only a single transcription start at about 700 bp upstream of the 17S rRNA gene and not of the minor start sites proposed for the very closely related species S. cerevisiae by others [Bayev et al. (5), Swanson and Holland (6)]. The sequence of 730 bp of the initiating region is presented. In vitro transcription in concentrated lysates of yeast spheroplasts in the presence of (gamma-SH)ATP or (gamma-SH)GTP, followed by purification of the in vitro initiated RNA via Hg-agarose, revealed that on the endogenous template exactly the same site is used for transcription initiation as in vivo.

摘要

我们已经对卡尔斯伯酵母中rRNA操纵子的转录起始进行了详细分析。对R环前体rRNA分子进行电子显微镜分析,并结合非常灵敏的S1核酸酶图谱分析,结果表明,转录起始仅使用17S rRNA基因上游约700 bp处的一个位点,而不是其他研究人员针对密切相关的酿酒酵母提出的次要起始位点[Bayev等人(5),Swanson和Holland(6)]。本文给出了起始区域730 bp的序列。在存在(γ-SH)ATP或(γ-SH)GTP的情况下,在酵母原生质体浓缩裂解物中进行体外转录,然后通过汞琼脂糖纯化体外起始的RNA,结果显示,在内源模板上,转录起始位点与体内完全相同。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ba6/318583/39c8cb2445f0/nar00321-0097-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ba6/318583/8054e1396080/nar00321-0092-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ba6/318583/401ec6b2f258/nar00321-0094-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ba6/318583/e6daf3303cc8/nar00321-0096-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ba6/318583/39c8cb2445f0/nar00321-0097-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ba6/318583/8054e1396080/nar00321-0092-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ba6/318583/401ec6b2f258/nar00321-0094-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ba6/318583/e6daf3303cc8/nar00321-0096-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ba6/318583/39c8cb2445f0/nar00321-0097-a.jpg

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本文引用的文献

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A yeast transcription system for the 5S rRNA gene.用于5S核糖体RNA基因的酵母转录系统。
Nucleic Acids Res. 1982 Sep 11;10(17):5223-38. doi: 10.1093/nar/10.17.5223.
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Specific transcription of homologous class III genes in yeast-soluble cell-free extracts.酵母可溶性无细胞提取物中同源III类基因的特异性转录
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Nucleoside 5'-[gamma-S]triphosphates will initiate transcription in isolated yeast nuclei.核苷5'-[γ-S]三磷酸将在分离的酵母细胞核中启动转录。
酵母中人工核糖体RNA基因的转录
EMBO J. 1984 Jun;3(6):1377-82. doi: 10.1002/j.1460-2075.1984.tb01980.x.
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Deletion mapping of the yeast Pol I promoter.酵母RNA聚合酶I启动子的缺失作图
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Synthesis of ribosomes in Saccharomyces cerevisiae.酿酒酵母中核糖体的合成
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Sequences within the spacer region of yeast rRNA cistrons that stimulate 35S rRNA synthesis in vivo mediate RNA polymerase I-dependent promoter and terminator activities.酵母rRNA顺反子间隔区中在体内刺激35S rRNA合成的序列介导RNA聚合酶I依赖性启动子和终止子活性。
Mol Cell Biol. 1989 Mar;9(3):1243-54. doi: 10.1128/mcb.9.3.1243-1254.1989.
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A new rRNA processing mutant of Saccharomyces cerevisiae.酿酒酵母的一种新的核糖体RNA加工突变体。
Nucleic Acids Res. 1992 Jan 25;20(2):295-301. doi: 10.1093/nar/20.2.295.
Biochemistry. 1981 Apr 28;20(9):2633-8. doi: 10.1021/bi00512a042.
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More ribosomal spacer sequences from Xenopus laevis.来自非洲爪蟾的更多核糖体间隔序列。
Nucleic Acids Res. 1980 Feb 11;8(3):467-85. doi: 10.1093/nar/8.3.467.
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The structure of the yeast ribosomal RNA genes. 2. The nucleotide sequence of the initiation site for ribosomal RNA transcription.酵母核糖体RNA基因的结构。2. 核糖体RNA转录起始位点的核苷酸序列。
Nucleic Acids Res. 1980 Nov 11;8(21):4919-26. doi: 10.1093/nar/8.21.4919.
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Initiation of ribosomal RNA chains in homogenates of oocyte nuclei.卵母细胞核匀浆中核糖体RNA链的起始合成
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7
Molecular cloning of the rDNA of Saccharomyces rosei and comparison of its transcription initiation region with that of Saccharomyces carlsbergensis.玫瑰酵母rDNA的分子克隆及其转录起始区域与卡尔斯伯酵母的比较。
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RNA polymerase I-dependent selective transcription of yeast ribosomal DNA. Identification of a new cellular ribosomal RNA precursor.酵母核糖体DNA的RNA聚合酶I依赖性选择性转录。一种新的细胞核糖体RNA前体的鉴定。
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The 5' terminus of the precursor ribosomal RNA of Saccharomyces cerevisiae.酿酒酵母前体核糖体RNA的5'末端。
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An agarose mercurial column for the separation of mercaptopapain and nonmercaptopapain.一种用于分离巯基木瓜蛋白酶和非巯基木瓜蛋白酶的琼脂糖汞柱。
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