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噬菌体λ整合基因调控区的DNA序列

DNA sequence of regulatory region for integration gene of bacteriophage lambda.

作者信息

Abraham J, Mascarenhas D, Fischer R, Benedik M, Campbell A, Echols H

出版信息

Proc Natl Acad Sci U S A. 1980 May;77(5):2477-81. doi: 10.1073/pnas.77.5.2477.

DOI:10.1073/pnas.77.5.2477
PMID:6446712
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC349423/
Abstract

The cII and cIII proteins specified by bacteriophage lambda direct the lysogenic response to infection through the coordinate establishment of repression and integration of the viral DNA. The regulatory activity of cII/cIII involves positive regulation of two promoter sites: the p(E) promoter, turning on expression of the cI protein that maintains lysogeny, and the p(I) promoter, activating synthesis of the Int protein for integrative recombination. Regulation of the p(I) promoter provides for differential expression of the Int protein with respect to the excision-specific Xis protein from the closely linked int and xis genes. We have determined the DNA sequence of the p(I) promoter region for wild-type lambda DNA and for two classes of mutations: intc mutations, which result in a high rate of Int synthesis in the absence of cII, and deletion mutations, some of which eliminate cII-activated expression of the int gene. We find a sequence with considerable homology (11 of 15 bases) to a "typical" (computer-generated) promoter sequence, adjacent to a region with striking homology (11 of 14 bases) to part of the p(E) promoter region. This presumed p(I) sequence overlaps the start of the xis gene and includes the site of two intc point mutations. A cII-insensitive xis(+) deletion partially removes the proposed p(I) sequence; a deletion that leaves the p(I) sequence intact but terminates 21 bases upstream does not interfere with cII activation of the int gene. From our results and the analysis of the p(E) region, we suggest that cII acts in the promoter -35 recognition region to facilitate binding by RNA polymerase at the -10 interaction region. Differential expression of the int and xis genes results because the p(I) transcript lacks the initiation codon for Xis protein synthesis.

摘要

噬菌体λ指定的cII和cIII蛋白通过病毒DNA阻遏和整合的协同建立,指导对感染的溶原反应。cII/cIII的调节活性涉及对两个启动子位点的正向调节:p(E)启动子,开启维持溶原性的cI蛋白的表达;p(I)启动子,激活用于整合重组的Int蛋白的合成。p(I)启动子的调节使得Int蛋白相对于来自紧密连锁的int和xis基因的切除特异性Xis蛋白有差异表达。我们已经确定了野生型λDNA以及两类突变的p(I)启动子区域的DNA序列:intc突变,其在没有cII的情况下导致Int的高合成率;缺失突变,其中一些消除了cII激活的int基因表达。我们发现一个与“典型”(计算机生成)启动子序列有相当同源性(15个碱基中有11个)的序列,与一个与p(E)启动子区域的一部分有显著同源性(14个碱基中有11个)的区域相邻。这个假定的p(I)序列与xis基因的起始重叠,并包括两个intc点突变的位点。一个对cII不敏感的xis(+)缺失部分去除了提议的p(I)序列;一个使p(I)序列完整但在其上游21个碱基处终止的缺失并不干扰cII对int基因的激活。根据我们的结果以及对p(E)区域的分析,我们认为cII在启动子的-35识别区域起作用,以促进RNA聚合酶在-10相互作用区域的结合。int和xis基因的差异表达是因为p(I)转录本缺乏Xis蛋白合成的起始密码子。

相似文献

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DNA sequence of regulatory region for integration gene of bacteriophage lambda.噬菌体λ整合基因调控区的DNA序列
Proc Natl Acad Sci U S A. 1980 May;77(5):2477-81. doi: 10.1073/pnas.77.5.2477.
2
Site-specific recombination functions of bacteriophage lambda: DNA sequence of regulatory regions and overlapping structural genes for Int and Xis.噬菌体λ的位点特异性重组功能:Int和Xis调控区及重叠结构基因的DNA序列
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Role of the Xis protein of bacteriophage lambda in a specific reactive complex at the attR prophage attachment site.噬菌体λ的Xis蛋白在attR原噬菌体附着位点的特异性反应复合物中的作用。
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Mutations that alter the DNA binding site for the bacteriophage lambda cII protein and affect the translation efficiency of the cII gene.改变噬菌体λ cII蛋白DNA结合位点并影响cII基因翻译效率的突变。
J Mol Biol. 1984 Dec 25;180(4):865-80. doi: 10.1016/0022-2836(84)90261-4.

引用本文的文献

1
Retroregulation of the int gene of bacteriophage lambda: control of translation completion.噬菌体λ int基因的反向调控:翻译完成的控制
Proc Natl Acad Sci U S A. 1981 Jul;78(7):4475-9. doi: 10.1073/pnas.78.7.4475.
2
Promoter for the establishment of repressor synthesis in bacteriophage lambda.噬菌体λ中阻遏物合成建立的启动子。
Proc Natl Acad Sci U S A. 1980 Jun;77(6):3191-5. doi: 10.1073/pnas.77.6.3191.
3
Site-specific recombination functions of bacteriophage lambda: DNA sequence of regulatory regions and overlapping structural genes for Int and Xis.噬菌体λ的位点特异性重组功能:Int和Xis调控区及重叠结构基因的DNA序列
Proc Natl Acad Sci U S A. 1980 May;77(5):2482-6. doi: 10.1073/pnas.77.5.2482.
4
Compilation and analysis of Escherichia coli promoter DNA sequences.大肠杆菌启动子DNA序列的汇编与分析
Nucleic Acids Res. 1983 Apr 25;11(8):2237-55. doi: 10.1093/nar/11.8.2237.
5
Posttranscriptional control of bacteriophage lambda gene expression from a site distal to the gene.噬菌体λ基因表达在远离该基因的位点的转录后调控。
Proc Natl Acad Sci U S A. 1982 Jan;79(2):238-42. doi: 10.1073/pnas.79.2.238.
6
Secondary lambda attachment site in the threonine operon attenuator of Escherichia coli.大肠杆菌苏氨酸操纵子衰减子中的二级λ附着位点。
J Bacteriol. 1981 Jun;146(3):1046-54. doi: 10.1128/jb.146.3.1046-1054.1981.
7
Kinetic analysis of mutations affecting the cII activation site at the PRE promoter of bacteriophage lambda.噬菌体λ PRE 启动子上影响 cII 激活位点的突变的动力学分析。
Proc Natl Acad Sci U S A. 1984 Oct;81(20):6432-6. doi: 10.1073/pnas.81.20.6432.
8
Homologies between different procaryotic DNA-binding regulatory proteins and between their sites of action.不同原核生物DNA结合调节蛋白之间及其作用位点之间的同源性。
EMBO J. 1982;1(5):591-5. doi: 10.1002/j.1460-2075.1982.tb01213.x.
9
Mutational analysis of a regulatory region in bacteriophage lambda that has overlapping signals for the initiation of transcription and translation.对噬菌体λ中一个调控区域的突变分析,该区域具有转录和翻译起始的重叠信号。
Proc Natl Acad Sci U S A. 1984 Jan;81(2):555-9. doi: 10.1073/pnas.81.2.555.
10
Conservation of nif- and species-specific domains within repeated promoter sequences from fast-growing Rhizobium species.快速生长的根瘤菌物种重复启动子序列中固氮基因和物种特异性结构域的保守性
Nucleic Acids Res. 1985 May 24;13(10):3407-18. doi: 10.1093/nar/13.10.3407.

本文引用的文献

1
Site-specific recombination functions of bacteriophage lambda: DNA sequence of regulatory regions and overlapping structural genes for Int and Xis.噬菌体λ的位点特异性重组功能:Int和Xis调控区及重叠结构基因的DNA序列
Proc Natl Acad Sci U S A. 1980 May;77(5):2482-6. doi: 10.1073/pnas.77.5.2482.
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Mapping and functional analysis of y and CII mutants.Y和CII突变体的定位与功能分析。
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Integration-negative mutants of bacteriophage lambda.噬菌体λ的整合阴性突变体
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Effect of mutations in the c2 and c3 genes of bacteriophage lambda on macromolecular synthesis in infected cells.噬菌体λ的c2和c3基因突变对受感染细胞中大分子合成的影响。
J Mol Biol. 1970 May 14;49(3):639-55. doi: 10.1016/0022-2836(70)90288-3.
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Establishment and maintenance of repression by bacteriophage lambda: the role of the cI, cII, and c3 proteins.噬菌体λ介导的基因沉默的建立与维持:cI、cII和c3蛋白的作用
Proc Natl Acad Sci U S A. 1971 Sep;68(9):2190-4. doi: 10.1073/pnas.68.9.2190.
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Control of lambda repressor synthesis.λ阻遏蛋白合成的调控
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7
New mutants of bacteriophage lambda with a specific defect in excision from the host chromosome.噬菌体λ的新突变体,其在从宿主染色体上切除时存在特定缺陷。
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Supercoiled circular DNA-protein complex in Escherichia coli: purification and induced conversion to an opern circular DNA form.大肠杆菌中的超螺旋环状DNA-蛋白质复合物:纯化及诱导转化为开放环状DNA形式
Proc Natl Acad Sci U S A. 1969 Apr;62(4):1159-66. doi: 10.1073/pnas.62.4.1159.
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New mutations in the S cistron of bacteriophage lambda affecting host cell lysis.噬菌体λ S顺反子中影响宿主细胞裂解的新突变。
Virology. 1969 May;38(1):200-2. doi: 10.1016/0042-6822(69)90148-2.
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Developmental pathways for the temperate phage: lysis vs lysogeny,温和噬菌体的发育途径:裂解与溶原化
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