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完整鸡δ-晶状体蛋白cDNA的核苷酸序列。

The nucleotide sequence of a complete chicken delta-crystallin cDNA.

作者信息

Yasuda K, Nakajima N, Isobe T, Okada T S, Shimura Y

出版信息

EMBO J. 1984 Jun;3(6):1397-402. doi: 10.1002/j.1460-2075.1984.tb01983.x.

DOI:10.1002/j.1460-2075.1984.tb01983.x
PMID:6547670
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC557529/
Abstract

The nucleotide sequence of a full length cDNA of delta-crystallin mRNA from chicken lens has been determined using a delta-crystallin cDNA clone (pB delta 11), which represents the mRNA sequence of 1530 nucleotides from the poly(A) junction but does not contain the 5'-terminal sequence of 44 nucleotides of the mRNA. The 5'-terminal sequence of the mRNA, absent in the cDNA clone, has been determined with a stretch of cDNA sequence by the primer extension procedure. The amino acid sequence deduced from the nucleotide sequence is consistent with the amino acid sequences of several tryptic peptides, the total amino acid composition, and the mol. wt. of delta-crystallin estimated by SDS-polyacrylamide gel electrophoresis. The computer-assisted analysis predicts high alpha-helical content throughout the polypeptide. Sequence analyses have revealed that gene 1 encodes the mRNA from which the cDNA clone was derived.

摘要

利用一个δ-晶体蛋白cDNA克隆(pBδ11)测定了来自鸡晶状体的δ-晶体蛋白mRNA全长cDNA的核苷酸序列,该克隆代表了从多聚腺苷酸连接点起1530个核苷酸的mRNA序列,但不包含mRNA 5′端44个核苷酸的序列。通过引物延伸法,利用一段cDNA序列确定了cDNA克隆中缺失的mRNA 5′端序列。从核苷酸序列推导的氨基酸序列与几个胰蛋白酶肽段的氨基酸序列、总氨基酸组成以及通过SDS-聚丙烯酰胺凝胶电泳估计的δ-晶体蛋白的分子量一致。计算机辅助分析预测整个多肽具有高α-螺旋含量。序列分析表明,基因1编码了产生该cDNA克隆的mRNA。

相似文献

1
The nucleotide sequence of a complete chicken delta-crystallin cDNA.完整鸡δ-晶状体蛋白cDNA的核苷酸序列。
EMBO J. 1984 Jun;3(6):1397-402. doi: 10.1002/j.1460-2075.1984.tb01983.x.
2
Sequence of a complete chicken delta-crystallin cDNA.完整鸡δ-晶体蛋白cDNA的序列
Proc Natl Acad Sci U S A. 1984 May;81(9):2611-5. doi: 10.1073/pnas.81.9.2611.
3
Structural and functional similarities of delta-crystallin messenger ribonucleic acids from duck and chicken lenses.鸭和鸡晶状体中δ-晶状体蛋白信使核糖核酸的结构与功能相似性。
Biochemistry. 1981 Oct 27;20(22):6427-31. doi: 10.1021/bi00525a022.
4
Nucleotide sequence of a chicken delta-crystallin gene.鸡δ-晶体蛋白基因的核苷酸序列。
Nucleic Acids Res. 1985 Mar 11;13(5):1593-606. doi: 10.1093/nar/13.5.1593.
5
Evidence against gamma-crystallin DNA or RNA sequences in the chicken.反对鸡体内存在γ-晶状体蛋白DNA或RNA序列的证据。
Exp Eye Res. 1984 Oct;39(4):513-22. doi: 10.1016/0014-4835(84)90051-4.
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Chicken lens crystallin DNA sequences show at least two delta-crystallin genes.鸡晶状体晶状体蛋白DNA序列显示至少有两个δ-晶状体蛋白基因。
Nature. 1980 Mar 20;284(5753):234-8. doi: 10.1038/284234a0.
7
Two delta-crystallin polypeptides are derived from a cloned delta 1-crystallin cDNA.
FEBS Lett. 1986 Sep 15;205(2):235-40. doi: 10.1016/0014-5793(86)80904-8.
8
Sequence analysis of pigeon delta-crystallin gene and its deduced primary structure. Comparison of avian delta-crystallins with and without endogenous argininosuccinate lyase activity.鸽δ-晶体蛋白基因的序列分析及其推导的一级结构。具有和不具有内源性精氨琥珀酸裂解酶活性的禽δ-晶体蛋白的比较。
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9
cDNA and deduced protein sequence for the beta B1-crystallin polypeptide of the chicken lens. Conservation of the PAPA sequence.鸡晶状体βB1-晶体蛋白多肽的cDNA及推导的蛋白质序列。PAPA序列的保守性。
J Biol Chem. 1986 Jan 15;261(2):982-7.
10
Organization of delta-crystallin genes in the chicken.鸡中δ-晶状体蛋白基因的组织方式。
Nucleic Acids Res. 1982 May 11;10(9):2879-91. doi: 10.1093/nar/10.9.2879.

引用本文的文献

1
Structural and functional evidence for differential promoter activity of the two linked delta-crystallin genes in the chicken.鸡体内两个相连的δ-晶状体蛋白基因启动子活性差异的结构和功能证据。
EMBO J. 1985 Feb;4(2):445-52. doi: 10.1002/j.1460-2075.1985.tb03649.x.
2
Lens-specific expression of the chloramphenicol acetyltransferase gene promoted by 5' flanking sequences of the murine alpha A-crystallin gene in explanted chicken lens epithelia.在移植的鸡晶状体上皮细胞中,由小鼠αA-晶状体蛋白基因的5'侧翼序列促进的氯霉素乙酰转移酶基因的晶状体特异性表达。
Proc Natl Acad Sci U S A. 1985 Apr;82(8):2334-8. doi: 10.1073/pnas.82.8.2334.
3

本文引用的文献

1
Electrophoretic and immunoelectrophoretic studies on the soluble proteins in the developing lens of birds.鸟类发育晶状体中可溶性蛋白质的电泳和免疫电泳研究。
Exp Eye Res. 1962 Jun;1:310-6. doi: 10.1016/s0014-4835(62)80017-7.
2
Two tryptic peptide differences among the subunits of delta-crystallin of the embryonic chick lens.胚胎期鸡晶状体δ-晶状体蛋白亚基间的两个胰蛋白酶肽差异。
Exp Eye Res. 1980 Apr;30(4):361-70. doi: 10.1016/0014-4835(80)90051-2.
3
Chicken lens crystallin DNA sequences show at least two delta-crystallin genes.鸡晶状体晶状体蛋白DNA序列显示至少有两个δ-晶状体蛋白基因。
Gene sharing by delta-crystallin and argininosuccinate lyase.
δ-晶状体蛋白与精氨琥珀酸裂解酶的基因共享
Proc Natl Acad Sci U S A. 1988 May;85(10):3479-83. doi: 10.1073/pnas.85.10.3479.
4
In vivo competition of delta-crystallin gene expression by DNA fragments containing a GC box.含GC框的DNA片段在体内对δ-晶体蛋白基因表达的竞争作用
Mol Cell Biol. 1986 Nov;6(11):4130-2. doi: 10.1128/mcb.6.11.4130-4132.1986.
5
The chicken delta 1-crystallin gene promoter: binding of transcription factor(s) to the upstream G+C-rich region is necessary for promoter function in vitro.鸡δ1-晶状体蛋白基因启动子:转录因子与富含G+C的上游区域结合是其体外启动子功能所必需的。
Proc Natl Acad Sci U S A. 1986 May;83(10):3131-5. doi: 10.1073/pnas.83.10.3131.
6
Tissue-specific regulation of a chicken delta-crystallin gene in mouse cells: involvement of the 5' end region.鸡δ-晶体蛋白基因在小鼠细胞中的组织特异性调控:5'端区域的作用
EMBO J. 1985 Sep;4(9):2201-7. doi: 10.1002/j.1460-2075.1985.tb03915.x.
7
Nucleotide sequence of a chicken delta-crystallin gene.鸡δ-晶体蛋白基因的核苷酸序列。
Nucleic Acids Res. 1985 Mar 11;13(5):1593-606. doi: 10.1093/nar/13.5.1593.
8
Conservation of delta-crystallin gene structure between ducks and chickens.鸭和鸡之间δ-晶体蛋白基因结构的保守性。
J Mol Evol. 1987;25(4):308-17. doi: 10.1007/BF02603115.
9
The 5' splice site: phylogenetic evolution and variable geometry of association with U1RNA.5'剪接位点:系统发育进化及与U1RNA结合的可变几何结构
Nucleic Acids Res. 1989 Mar 25;17(6):2159-80. doi: 10.1093/nar/17.6.2159.
Nature. 1980 Mar 20;284(5753):234-8. doi: 10.1038/284234a0.
4
The accumulation of lens-specific protein and mRNA in cultures of neural retina from 3 1/2-day chick embryos.
Exp Cell Res. 1981 Oct;135(2):445-9. doi: 10.1016/0014-4827(81)90188-9.
5
Possible role of flanking nucleotides in recognition of the AUG initiator codon by eukaryotic ribosomes.侧翼核苷酸在真核生物核糖体识别AUG起始密码子中的可能作用。
Nucleic Acids Res. 1981 Oct 24;9(20):5233-52. doi: 10.1093/nar/9.20.5233.
6
The amino-acid sequence of the alpha subunit in bovine brain S-100a protein.牛脑S-100a蛋白中α亚基的氨基酸序列。
Eur J Biochem. 1981 May;116(1):79-86. doi: 10.1111/j.1432-1033.1981.tb05303.x.
7
The nucleic acid and deduced protein sequence of cDNA clones for delta-crystallin of the chicken lens.
FEBS Lett. 1982 Aug 2;144(2):289-92. doi: 10.1016/0014-5793(82)80656-x.
8
Degradation of delta-crystallin mRNA in the lens fiber cells of the chicken.鸡晶状体纤维细胞中δ-晶状体蛋白mRNA的降解
Dev Biol. 1982 Jul;92(1):60-5. doi: 10.1016/0012-1606(82)90150-6.
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Lens differentiation in vertebrates. A review of cellular and molecular features.脊椎动物的晶状体分化。细胞和分子特征综述。
Differentiation. 1981;19(3):134-53. doi: 10.1111/j.1432-0436.1981.tb01141.x.
10
Cellular metaplasia or transdifferentiation as a model for retinal cell differentiation.细胞化生或转分化作为视网膜细胞分化的模型
Curr Top Dev Biol. 1980;16:349-80.