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许多基因调控蛋白似乎具有相似的结合DNA的α螺旋结构,并且由一个共同的前体进化而来。

Many gene-regulatory proteins appear to have a similar alpha-helical fold that binds DNA and evolved from a common precursor.

作者信息

Ohlendorf D H, Anderson W F, Matthews B W

出版信息

J Mol Evol. 1983;19(2):109-14. doi: 10.1007/BF02300748.

DOI:10.1007/BF02300748
PMID:6571216
Abstract

Amino acid and DNA sequence comparisons suggest that many sequence-specific DNA-binding proteins have in common an homologous region of about 22 amino acids. This region corresponds to two consecutive alpha-helices that occur in both Cro and cI repressor proteins of bacteriophage lambda and in catabolite gene activator protein of Escherichia coli and are presumed to interact with DNA. The results obtained here suggest that this alpha-helical DNA-binding fold occurs in many proteins that regulate gene expression. It also appears that this DNA-binding unit evolved from a common evolutionary precursor.

摘要

氨基酸和DNA序列比较表明,许多序列特异性DNA结合蛋白共有一个约22个氨基酸的同源区域。该区域对应于噬菌体λ的Cro和cI阻遏蛋白以及大肠杆菌的分解代谢基因激活蛋白中出现的两个连续的α螺旋,推测它们与DNA相互作用。此处获得的结果表明,这种α螺旋DNA结合结构域存在于许多调节基因表达的蛋白质中。此外,这种DNA结合单元似乎起源于一个共同的进化前体。

相似文献

1
Many gene-regulatory proteins appear to have a similar alpha-helical fold that binds DNA and evolved from a common precursor.许多基因调控蛋白似乎具有相似的结合DNA的α螺旋结构,并且由一个共同的前体进化而来。
J Mol Evol. 1983;19(2):109-14. doi: 10.1007/BF02300748.
2
High resolution structural studies of Cro repressor protein and implications for DNA recognition.Cro阻遏蛋白的高分辨率结构研究及其对DNA识别的意义。
J Biomol Struct Dyn. 1983 Oct;1(2):553-63. doi: 10.1080/07391102.1983.10507461.
3
Comparison of the structures of cro and lambda repressor proteins from bacteriophage lambda.来自噬菌体λ的cro蛋白和λ阻遏蛋白结构的比较。
J Mol Biol. 1983 Sep 25;169(3):757-69. doi: 10.1016/s0022-2836(83)80169-7.
4
Protein-DNA recognition.蛋白质-脱氧核糖核酸识别
Annu Rev Biochem. 1984;53:293-321. doi: 10.1146/annurev.bi.53.070184.001453.
5
The molecular basis of DNA-protein recognition inferred from the structure of cro repressor.从cro阻遏蛋白结构推断的DNA-蛋白质识别的分子基础。
Nature. 1982 Aug 19;298(5876):718-23. doi: 10.1038/298718a0.
6
Homology among DNA-binding proteins suggests use of a conserved super-secondary structure.DNA结合蛋白之间的同源性表明存在保守的超二级结构。
Nature. 1982 Jul 29;298(5873):447-51. doi: 10.1038/298447a0.
7
Secondary structure switching in Cro protein evolution.Cro蛋白进化中的二级结构转换。
Structure. 2004 Apr;12(4):569-81. doi: 10.1016/j.str.2004.02.024.
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[Synthesis of nonlinear DNA-binding peptide with binding specificity determinants close to those of 434 Cro-repressor].[具有与434 Cro阻遏物相近结合特异性决定簇的非线性DNA结合肽的合成]
Mol Biol (Mosk). 1989 Nov-Dec;23(6):1558-80.
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Structural similarity in the DNA-binding domains of catabolite gene activator and cro repressor proteins.分解代谢物基因激活蛋白与Cro阻遏蛋白的DNA结合结构域中的结构相似性。
Proc Natl Acad Sci U S A. 1982 May;79(10):3097-100. doi: 10.1073/pnas.79.10.3097.
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[Local homology of amino acid sequences of histones H3, H4 and the protein repressor lambda Cro. Possible conformation of homologous histone sites in DNP].[组蛋白H3、H4的氨基酸序列与蛋白质阻遏物λ Cro的局部同源性。脱氧核蛋白中同源组蛋白位点的可能构象]
Biokhimiia. 1988 Dec;53(12):1980-6.

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