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谷氨酸脱氢酶-NADPH-草酰甘氨酸复合物中的热力学相互作用。

Thermodynamic interactions in the glutamate dehydrogenase-NADPH-oxalylglycine complex.

作者信息

Fisher H F, Medary R T, Wykes E J, Wolfe C S

出版信息

J Biol Chem. 1984 Apr 10;259(7):4105-10.

PMID:6706993
Abstract

The enzyme-reduced coenzyme-alpha-ketoglutarate ternary complex is a critical intermediate in the glutamate dehydrogenase-catalyzed reaction. Oxalylglycine, a structural analog of alpha-ketoglutarate which contains an amide carbonyl group in place of a reducible ketone group, is one of the few compounds known to complete with alpha-ketoglutarate itself. In order to examine the role of the ketone group of alpha-ketoglutarate in the ternary complex, we have carried out a calorimetric study of the corresponding oxalylglycine ternary complex, determining the complete delta H, delta G, delta S, and delta Cp profiles and the corresponding interaction parameters for that complex and have compared the various parameters with the corresponding ones previously reported for the alpha-ketoglutarate ternary complex. While the overall delta G values of the two ternary complexes differ only slightly, the enzyme-NADPH-oxalylglycine ternary complex appears to achieve much of its stability from a very tight enzyme-oxalylglycine binary complex with little or no contribution from favorable interactions in the ternary complex, while the alpha-ketoglutarate ternary complex appears to achieve the same stability by a large interaction starting from a very weak enzyme-alpha-ketoglutarate binary complex. Consideration of the enthalpic profiles, however, show that this delta G-derived picture is deceptive. The excess binding energy which stabilizes the oxalylglycine binary is in fact due to hydrogen bonding of the amide group of oxalylglycine to the enzyme; in forming the ternary complex, this hydrogen bonding is lost in favor of forming an oxalylglycine-NADPH interaction, which is very similar to the alpha-ketoglutarate-NADPH interaction which stabilizes the alpha-ketoglutarate ternary complex. We conclude that the alpha-ketoglutarate-NADPH interaction must depend on either hydrogen bonding to or steric hindrance by the ketone group and that the existence of this energetically large interaction cannot be ascribed to imine formation between the keto group and enzyme. These findings also indicate the locus on the reaction coordinate where the reduced coenzyme plays a critical role, a role other than its obvious function as a hydride donor.

摘要

酶 - 还原型辅酶 - α - 酮戊二酸三元复合物是谷氨酸脱氢酶催化反应中的关键中间体。草酰甘氨酸是α - 酮戊二酸的结构类似物,其含有酰胺羰基以取代可还原的酮基,是已知的少数能与α - 酮戊二酸本身竞争的化合物之一。为了研究α - 酮戊二酸的酮基在三元复合物中的作用,我们对相应的草酰甘氨酸三元复合物进行了量热研究,确定了完整的ΔH、ΔG、ΔS和ΔCp曲线以及该复合物的相应相互作用参数,并将各种参数与先前报道的α - 酮戊二酸三元复合物的相应参数进行了比较。虽然两种三元复合物的总体ΔG值仅略有不同,但酶 - NADPH - 草酰甘氨酸三元复合物似乎从非常紧密的酶 - 草酰甘氨酸二元复合物中获得了大部分稳定性,三元复合物中有利相互作用的贡献很小或没有,而α - 酮戊二酸三元复合物似乎通过从非常弱的酶 - α - 酮戊二酸二元复合物开始的大量相互作用来实现相同的稳定性。然而,对焓曲线的考虑表明,这种由ΔG得出的情况具有欺骗性。稳定草酰甘氨酸二元复合物的额外结合能实际上是由于草酰甘氨酸的酰胺基团与酶形成了氢键;在形成三元复合物时,这种氢键会消失,转而形成草酰甘氨酸 - NADPH相互作用,这与稳定α - 酮戊二酸三元复合物的α - 酮戊二酸 - NADPH相互作用非常相似。我们得出结论,α - 酮戊二酸 - NADPH相互作用必须依赖于与酮基的氢键作用或空间位阻,并且这种能量上较大的相互作用的存在不能归因于酮基与酶之间形成亚胺。这些发现还表明了还原型辅酶在反应坐标上发挥关键作用的位置,这一作用不同于其作为氢化物供体的明显功能。

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