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谷氨酸脱氢酶的动力学机制。

Kinetic mechanism of glutamate dehydrogenase.

作者信息

Rife J E, Cleland W W

出版信息

Biochemistry. 1980 May 27;19(11):2321-8. doi: 10.1021/bi00552a007.

Abstract

Initial velocity patterns and dead-end inhibition studies with oxalylglycine suggest that the addition of NADPH, keto acid, and ammonia occurs with obligatory order. For monocarboxylic keto acids, the keto acid-ammonia initial velocity pattern is equilibrium ordered because koff is much greater than Vmax. alpha-Ketoglutarate gives substrate inhibition that is uncompetitive vs. either NADPH or ammonia in the absence of NADP+, but with high NAD+ is noncompetitive vs. NADPH and uncompetitive vs. ammonia. The inhibition is partial on both slopes and intercepts, showing that ketoglutarate slows down but does not prevent NADP+ release, and that it forms a weak but kinetically competent E-ketoglutarate complex. The apparent ordered combination of NADPH and keto acid thus results from strong synergism in binding. Deuterium isotope effects, together with the substrate inhibition patterns for ketoglutarate, show that addition of amino acid and NADP+ is random, with NADP+ being released from the ternary complex more rapidly than either glutamate or norvaline. With norvaline, hydride transfer is a major rate-limiting step, while with glutamate a step preceding hydride transfer is slower than hydride transfer. The equilibrium 18O isotope effect is 1.031 +/- 0.006 (18O enriching in ketoglutarate relative to water), but no kinetic 18O isotope effect was seen.

摘要

草酰甘氨酸的初始速度模式和终产物抑制研究表明,NADPH、酮酸和氨的添加具有必然顺序。对于一元羧酸酮酸,酮酸 - 氨的初始速度模式是平衡有序的,因为解离常数(koff)远大于最大反应速度(Vmax)。α - 酮戊二酸产生底物抑制,在没有NADP + 时,对NADPH或氨而言是非竞争性的,但在高NAD + 存在时,对NADPH是非竞争性的,对氨是非竞争性的。这种抑制在斜率和截距上都是部分性的,表明酮戊二酸会减缓但不会阻止NADP + 的释放,并且它形成了一个弱但具有动力学活性的E - 酮戊二酸复合物。因此,NADPH和酮酸明显的有序结合是由结合中的强协同作用导致的。氘同位素效应以及酮戊二酸的底物抑制模式表明,氨基酸和NADP + 的添加是随机的,NADP + 从三元复合物中释放的速度比谷氨酸或正缬氨酸都要快。对于正缬氨酸,氢化物转移是主要的限速步骤,而对于谷氨酸,氢化物转移之前的一步比氢化物转移慢。平衡18O同位素效应为1.031±0.006(相对于水,18O在酮戊二酸中富集),但未观察到动力学18O同位素效应。

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