Bordas J, Bray R C, Garner C D, Gutteridge S, Hasnain S S
Biochem J. 1980 Nov 1;191(2):499-508. doi: 10.1042/bj1910499.
X-ray absorption spectra have been recorded for the molybdenum K-edge region of xanthine oxidase. Both the absorption edge and the extended fine structure (e.x.a.f.s.) regions were investigated. Spectra were obtained for samples of the desulpho enzyme as well as for mixtures of this with the active enzyme. The spectrum of the pure active form was then obtained by difference. The desulpho enzyme shows a pronounced step in the absorption edge, of a type previously associated terminal oxygen ligands. In the active enzyme this step has decreased markedly. Satisfactory simulations of the e.x.a.f.s. spectrum of the desulpho enzyme could be obtained by assuming the molybdenum to be bonded to two terminal oxygen atoms (Mo = O about .175 nm), two sulphur atoms (presumably from cysteine residues, Mo-S about .0250 nm) and one sulphur atom (presumably from a methionine residue, Mo-S about 0.290 nm). E.x.a.f.s. of the active enzyme differed appreciably from this. In keeping with earlier proposals [Gutteridge, Tanner & Bray (1978) Biochem. J. 175, 887-897], the spectrum of the active enzyme could be simulated if a sulphur atom at about 0.225 nm (i.e. presumably a terminal sulphur atom) replaced one of the terminal oxygen atoms of the desulpho from, with small changes in the other bond distances. Validity of the interpretative procedures, which involved phase shift and amplitude calculations ab initio, was demonstrated by using low molecular weight compounds of known structure.
已记录了黄嘌呤氧化酶钼K边区域的X射线吸收光谱。对吸收边和扩展精细结构(EXAFS)区域均进行了研究。获得了脱硫酶样品及其与活性酶混合物的光谱。然后通过差值得到纯活性形式的光谱。脱硫酶在吸收边显示出明显的台阶,这种类型先前与末端氧配体相关。在活性酶中,这个台阶明显减小。通过假设钼与两个末端氧原子(Mo = O约0.175nm)、两个硫原子(可能来自半胱氨酸残基,Mo-S约0.0250nm)和一个硫原子(可能来自甲硫氨酸残基,Mo-S约0.290nm)键合,可以得到脱硫酶EXAFS光谱的满意模拟。活性酶的EXAFS与此明显不同。与早期的提议一致[Gutteridge, Tanner & Bray (1978) Biochem. J. 175, 887 - 897],如果一个约0.225nm的硫原子(即可能是一个末端硫原子)取代脱硫酶的一个末端氧原子,同时其他键距有小的变化,就可以模拟活性酶的光谱。通过使用已知结构的低分子量化合物,证明了涉及从头计算相移和振幅的解释程序的有效性。