蛋白质拓扑结构的相似性：进化分歧、功能趋同还是折叠原则？ - Suppr

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Similarities of protein topologies: evolutionary divergence, functional convergence or principles of folding?

作者信息

Ptitsyn O B, Finkelstein A V

出版信息

Q Rev Biophys. 1980 Aug;13(3):339-86. doi: 10.1017/s0033583500001724.

DOI:10.1017/s0033583500001724

PMID:7012894

Abstract

摘要

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相似文献

Q Rev Biophys. 1980 Aug;13(3):339-86. doi: 10.1017/s0033583500001724.

Protein folding.

Annu Rev Biochem. 1981;50:497-532. doi: 10.1146/annurev.bi.50.070181.002433.

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Sci Am. 1991 Jan;264(1):54-7, 60-3. doi: 10.1038/scientificamerican0191-54.

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Annu Rev Biochem. 1990;59:1007-39. doi: 10.1146/annurev.bi.59.070190.005043.

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Orig Life. 1984;14(1-4):693-8. doi: 10.1007/BF00933723.

Physicochemical properties of signal receptor domains as the basis for sequence comparison.

Comp Biochem Physiol B. 1991;98(4):445-9. doi: 10.1016/0305-0491(91)90238-9.

Teams tackle protein prediction.

Science. 1996 Jul 26;273(5274):426-8. doi: 10.1126/science.273.5274.426.

Is there a single pathway for the folding of a polypeptide chain?

Proc Natl Acad Sci U S A. 1985 Jun;82(12):4028-30. doi: 10.1073/pnas.82.12.4028.

Evolution of enzyme structure.

Proc R Soc Lond B Biol Sci. 1979 Sep 21;205(1161):443-52. doi: 10.1098/rspb.1979.0078.

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Curr Opin Struct Biol. 1996 Feb;6(1):3-10. doi: 10.1016/s0959-440x(96)80088-1.

引用本文的文献

Protein folding problem: enigma, paradox, solution.

Biophys Rev. 2022 Oct 11;14(6):1255-1272. doi: 10.1007/s12551-022-01000-1. eCollection 2022 Dec.

Unfolding of CPR3 Gets Initiated at the Active Site and Proceeds via Two Intermediates.

Biophys J. 2017 Feb 28;112(4):605-619. doi: 10.1016/j.bpj.2016.12.020.

How a spatial arrangement of secondary structure elements is dispersed in the universe of protein folds.

PLoS One. 2014 Sep 22;9(9):e107959. doi: 10.1371/journal.pone.0107959. eCollection 2014.

SCOP2 prototype: a new approach to protein structure mining.

Nucleic Acids Res. 2014 Jan;42(Database issue):D310-4. doi: 10.1093/nar/gkt1242. Epub 2013 Nov 29.

An empirical test of convergent evolution in rhodopsins.

Mol Biol Evol. 2014 Jan;31(1):85-95. doi: 10.1093/molbev/mst171. Epub 2013 Sep 27.

Rebelling for a reason: protein structural "outliers".

PLoS One. 2013 Sep 20;8(9):e74416. doi: 10.1371/journal.pone.0074416. eCollection 2013.

Application of improved three-dimensional kernel approach to prediction of protein structural class.

Biomed Res Int. 2013;2013:625403. doi: 10.1155/2013/625403. Epub 2013 Jun 26.

Molecular evolution of enzymes involved in the arachidonic acid cascade.

Mediators Inflamm. 1992;1(4):223-33. doi: 10.1155/S0962935192000346.

High-affinity binding of the staphylococcal HarA protein to haptoglobin and hemoglobin involves a domain with an antiparallel eight-stranded beta-barrel fold.

J Bacteriol. 2007 Jan;189(1):254-64. doi: 10.1128/JB.01366-06. Epub 2006 Oct 13.

Strict rules determine arrangements of strands in sandwich proteins.

Proc Natl Acad Sci U S A. 2006 Mar 14;103(11):4107-10. doi: 10.1073/pnas.0510747103. Epub 2006 Mar 2.