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Amide proton spin-lattice relaxation in polypeptides. A field-dependence study of the proton and nitrogen dipolar interactions in alumichrome.多肽中的酰胺质子自旋-晶格弛豫。铝铬合物中质子与氮偶极相互作用的场依赖性研究。
Biophys J. 1978 Dec;24(3):849-62. doi: 10.1016/S0006-3495(78)85424-1.
2
The solution conformations of ferrichrome and deferriferrichrome determined by 1H-NMR spectroscopy and computational modeling.通过1H-NMR光谱和计算模型确定的高铁菌素和去铁高铁菌素的溶液构象。
Biopolymers. 1990;30(3-4):239-56. doi: 10.1002/bip.360300303.
3
The quadrupole enhanced 1H spin-lattice relaxation of the amide proton in slow tumbling proteins.在缓慢转动的蛋白质中,四极矩增强的酰胺质子 1H 自旋晶格弛豫。
Phys Chem Chem Phys. 2010 Apr 7;12(13):3136-40. doi: 10.1039/b922817a. Epub 2010 Feb 10.
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High-resolution field-cycling NMR studies of a DNA octamer as a probe of phosphodiester dynamics and comparison with computer simulation.以DNA八聚体为磷酸二酯动力学探针的高分辨率场循环核磁共振研究及与计算机模拟的比较。
Biochemistry. 2004 Mar 30;43(12):3637-50. doi: 10.1021/bi035979q.
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Tryptophan sidechain dynamics in hydrophobic oligopeptides determined by use of 13C nuclear magnetic resonance spectroscopy.利用碳-13核磁共振光谱法测定疏水性寡肽中色氨酸侧链的动力学
Biophys J. 1988 Jul;54(1):1-15. doi: 10.1016/S0006-3495(88)82925-4.
6
A nitrogen-15 spin-lattice relaxation study of alumichrome.铝铬合物的氮-15自旋晶格弛豫研究。
Biochim Biophys Acta. 1978 Jan 25;532(1):29-40. doi: 10.1016/0005-2795(78)90444-0.
7
Proton relaxation mechanisms and the measurements of r phi, r psi and transannular interproton distances in gramicidin S.短杆菌肽S中的质子弛豫机制以及r phi、r psi和跨环质子间距离的测量
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8
31P NMR relaxation studies of the activation of the coenzyme phosphate of glycogen phosphorylase. The role of motion of the bound phosphate.糖原磷酸化酶辅酶磷酸激活的³¹P核磁共振弛豫研究。结合态磷酸运动的作用。
Biophys J. 1985 Dec;48(6):1019-26. doi: 10.1016/S0006-3495(85)83864-9.
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The quantitation of nuclear Overhauser effect methods for total conformational analysis of peptides in solution. Application to gramicidin S.溶液中肽段全构象分析的核Overhauser效应方法定量。应用于短杆菌肽S。
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10
The structure of two alanine containing ferrichromes: sequence determination by proton magnetic resonance.两种含丙氨酸的铁色素的结构:通过质子磁共振进行序列测定。
Biophys Struct Mech. 1976 Aug 23;2(2):105-17. doi: 10.1007/BF00863704.

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本文引用的文献

1
Malformation of the Soft Palate and Uvula in a Girl, aged 16.一名16岁女孩的软腭和悬雍垂畸形
Proc R Soc Med. 1910;3(Laryngol Sect):131. doi: 10.1177/003591571000300695.
2
Ferrichrome-A tetrahydrate. Determination of crystal and molecular structure.高铁载体-A四水合物。晶体和分子结构的测定。
J Am Chem Soc. 1966 Apr 20;88(8):1810-4. doi: 10.1021/ja00960a040.
3
Solution conformation of the ferrichromes. A comparative proton magnetic resonance study of glycine- and serine-containing ferrichromes.铁色素的溶液构象。含甘氨酸和丝氨酸的铁色素的质子磁共振对比研究。
J Mol Biol. 1972 Jul 21;68(2):265-84. doi: 10.1016/0022-2836(72)90213-6.
4
Proton spin lattice relaxation time measurements at 90MHz and 270 MHz.在90兆赫和270兆赫下进行质子自旋晶格弛豫时间测量。
Biochim Biophys Acta. 1973 May 17;310(1):1-10. doi: 10.1016/0005-2795(73)90002-0.
5
On the conformation of cyclic iron-containing hexapeptides: the crystal and molecular structure of ferrichrysin.关于环状含铁六肽的构象:铁胆绿素的晶体结构和分子结构
J Mol Biol. 1975 Dec 15;99(3):501-6. doi: 10.1016/s0022-2836(75)80141-0.
6
Nitrogen-15 nuclear magnetic resonance spectrum of alumichrome. Detection by a double resonance Fourier transform technique.铝铬合物的氮-15核磁共振谱。采用双共振傅里叶变换技术进行检测。
J Am Chem Soc. 1976 Nov 24;98(24):7554-8. doi: 10.1021/ja00440a018.
7
Peptide hydrogen bonding. Conformation dependence of the carbonyl carbon-13 nuclear magnetic resonance chemical shifts in ferrichrome. A study by 13C-[15N] Fourier double resonance spectroscopy1a.肽氢键。高铁色素中羰基碳-13核磁共振化学位移的构象依赖性。一项采用13C-[15N]傅里叶双共振光谱法的研究1a。
J Am Chem Soc. 1977 Oct 12;99(21):6846-50. doi: 10.1021/ja00463a010.
8
A carbon-13 spin lattice relaxation study of alumichrome at 25.1 MHz and 90.5 MHz.在25.1兆赫兹和90.5兆赫兹频率下对铝铬合物进行的碳-13自旋晶格弛豫研究。
Biochim Biophys Acta. 1977 May 27;492(1):1-11. doi: 10.1016/0005-2795(77)90208-2.
9
Peptide strain. Conformation dependence of the carbon-13 nuclear magnetic resonance chemical shifts in the ferrichromes.肽链构象。高铁色素中碳-13核磁共振化学位移的构象依赖性。
J Am Chem Soc. 1977 May 25;99(11):3631-7. doi: 10.1021/ja00453a020.
10
Experimental evidence for the role of cross-relaxation in proton nuclear magnetic resonance spin lattice relaxation time measurements in proteins.交叉弛豫在蛋白质质子核磁共振自旋晶格弛豫时间测量中的作用的实验证据。
Biophys J. 1978 Feb;21(2):137-46. doi: 10.1016/S0006-3495(78)85514-3.

多肽中的酰胺质子自旋-晶格弛豫。铝铬合物中质子与氮偶极相互作用的场依赖性研究。

Amide proton spin-lattice relaxation in polypeptides. A field-dependence study of the proton and nitrogen dipolar interactions in alumichrome.

作者信息

Llinás M, Klein M P, Wüthrich K

出版信息

Biophys J. 1978 Dec;24(3):849-62. doi: 10.1016/S0006-3495(78)85424-1.

DOI:10.1016/S0006-3495(78)85424-1
PMID:737289
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1473506/
Abstract

The proton nuclear magnetic resonance (NMR) spin-lattice relaxation of all six amides of deferriferrichrome and of various alumichromes dissolved in hexadeutero-dimethylsulfoxide have been investigated at 100, 220, and 360 MHz. We find that, depending on the type of residue (glycyl or ornithyl), the amide proton relaxation rates are rather uniform in the metal-free cyclohexapeptide. In contrast, the (1)H spinlattice relaxation times (T(1)'s) are distinct in the Al(3+)-coordination derivative. Similar patterns are observed in a number of isomorphic alumichrome homologues that differ in single-site residue substitutions, indicating that the spin-lattice relaxation rate is mainly determined by dipole-dipole interactions within a rigid molecular framework rather than by the specific primary structures. Analysis of the data in terms of (1)H-(1)H distances (r) calculated from X-ray coordinates yields a satisfactory linear fit between T(1) (-1) and Sigmar(-6) at the three magnetic fields. Considering the very sensitive r-dependence of T(1), the agreement gives confidence, at a quantitative level, both on the fitness of the crystallographic model to represent the alumichromes' solution conformation and on the validity of assuming isotropic rotational motion for the globular metallopeptides. An extra contribution to the amide proton T(1) (-1) is proposed to mainly originate from the (1)H-(14)N dipolar interaction: this was supported by comparison with measurements on an (15)N-enriched peptide. The nitrogen dipolar contribution to the peptide proton relaxation is discussed in the context of {(1)H}-(1)H nuclear Overhauser enhancement (NOE) studies because, especially at high fields, it can be dominant in determining the amide proton relaxation rates and hence result in a decreased effectiveness for the (1)H-(1)H dipolar mechanism to cause NOE's. From the slope and intersect values of T(1) (-1) vs. Sigmar(-6) linear plots, a number of independent estimates of tau(r), the rotational correlation time, were derived. These and the field-dependence of the T(1)'s yield a best estimate <tau(r)> approximately 0.37 ns, in good agreement with 0.38 ns [unk] <tau(r)> [unk] 0.41 ns, previously determined from (13)C and (15)N spin-lattice relaxation data.

摘要

已在100兆赫、220兆赫和360兆赫下研究了去铁铁载体的所有六种酰胺以及溶解于十六氘代二甲基亚砜中的各种铝载体的质子核磁共振(NMR)自旋晶格弛豫。我们发现,根据残基类型(甘氨酰基或鸟氨酰基),无金属环六肽中的酰胺质子弛豫率相当均匀。相比之下,在Al(3+)配位衍生物中,(1)H自旋晶格弛豫时间(T(1))是不同的。在一些在单一位点残基取代上不同的同构铝载体同系物中观察到了类似的模式,这表明自旋晶格弛豫率主要由刚性分子框架内的偶极 - 偶极相互作用决定,而不是由特定的一级结构决定。根据由X射线坐标计算出的(1)H - (1)H距离(r)对数据进行分析,在三个磁场下,T(1)(-1)与Sigmar(-6)之间得到了令人满意的线性拟合。考虑到T(1)对r的非常敏感的依赖性,这种一致性在定量水平上既让人相信晶体学模型适合代表铝载体溶液构象,也让人相信假设球状金属肽具有各向同性旋转运动的有效性。有人提出酰胺质子T(1)(-1)的额外贡献主要源于(1)H - (14)N偶极相互作用:这通过与对一种(15)N富集肽的测量结果进行比较得到了支持。在{(1)H}-(1)H核Overhauser增强(NOE)研究的背景下讨论了氮偶极对肽质子弛豫的贡献,因为特别是在高场下,它在决定酰胺质子弛豫率方面可能占主导地位,从而导致(1)H - (1)H偶极机制产生NOE的有效性降低。从T(1)(-1)与Sigmar(-6)线性图的斜率和截距值中,得出了旋转相关时间tau(r)的一些独立估计值。这些以及T(1)的场依赖性得出最佳估计值<tau(r)>约为0.37纳秒,与先前从(13)C和(15)N自旋晶格弛豫数据确定的0.38纳秒[unk]<tau(r)>[unk]0.41纳秒非常吻合。