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噬菌体P2衍生物中DNA片段的串联五重复:其在DNA退火机制研究中的应用

Tandem pentuplication of a DNA segment in a derivative of bacteriophage P2: its use in the study of the mechanism of DNA annealing.

作者信息

Bertani G, Chattoraj D K

出版信息

Nucleic Acids Res. 1980 Mar 25;8(6):1339-56. doi: 10.1093/nar/8.6.1339.

DOI:10.1093/nar/8.6.1339
PMID:7433123
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC323995/
Abstract

From a tandem duplication mutant of phage P2, triplication, quadruplication and pentuplication forms were derived. They were recognized by decreased virion heat stability resulting from the increase in DNA content, and were confirmed by electron microscope heteroduplex mapping. These forms of partially repeated DNA are quite stable in P2 because of the low level of recombination typical of this phage. Under conditions normally employed for full DNA renaturation, these high order repeat chromosomes gave often incomplete renaturation over the repeated segments. Based on current models for DNA renaturation, several predictions were made and tested. The results, although not quantitatively exhaustive, indicated that base pairing proceeding from a nucleation site was sufficiently slow to allow a second nucleation to occur with a fair probability over a length of a few thousand base pairs.

摘要

从噬菌体P2的串联重复突变体中,衍生出了三倍体、四倍体和五倍体形式。它们通过病毒粒子热稳定性降低(这是由于DNA含量增加所致)得以识别,并通过电子显微镜异源双链图谱分析得到证实。由于这种噬菌体典型的低重组水平,这些部分重复DNA形式在P2中相当稳定。在通常用于DNA完全复性的条件下,这些高阶重复染色体在重复片段上常常出现不完全复性。基于当前的DNA复性模型,做出了几个预测并进行了测试。结果虽然在数量上并不详尽,但表明从成核位点开始的碱基配对足够缓慢,以至于在几千个碱基对的长度上,相当有可能发生第二次成核。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8825/323995/0820f8902219/nar00423-0169-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8825/323995/0820f8902219/nar00423-0169-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8825/323995/0820f8902219/nar00423-0169-a.jpg

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本文引用的文献

1
Physical mapping of bacteriophage P2 mutations and their relation to the genetic map.噬菌体P2突变的物理图谱及其与遗传图谱的关系。
Mol Gen Genet. 1975;136(2):139-49. doi: 10.1007/BF00272035.
2
Deletions in bacteriophage P2. Circularity of the genetic map and its orientation relative to the DNA denaturation map.噬菌体P2中的缺失。遗传图谱的环状结构及其相对于DNA变性图谱的方向。
Mol Gen Genet. 1975;136(2):107-37. doi: 10.1007/BF00272034.
3
Kinetics of renaturation of DNA.DNA复性动力学
对影响噬菌体P2溶原性控制的缺失和取代突变体的进一步物理特性分析。
Mol Gen Genet. 1980 Apr;178(1):85-90. doi: 10.1007/BF00267216.
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Analysis of spontaneous deletion mutants of satellite bacteriophage P4.卫星噬菌体P4自发缺失突变体的分析
J Virol. 1985 Apr;54(1):233-5. doi: 10.1128/JVI.54.1.233-235.1985.
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A restriction endonuclease cleavage map of bacteriophage P2.噬菌体P2的限制性内切酶切割图谱。
Mol Gen Genet. 1979 Mar 9;171(1):91-102. doi: 10.1007/BF00274019.
J Mol Biol. 1968 Feb 14;31(3):349-70. doi: 10.1016/0022-2836(68)90414-2.
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Genetics of P2 and related phages.P2及相关噬菌体的遗传学
Adv Genet. 1971;16:199-237. doi: 10.1016/s0065-2660(08)60359-4.
5
Heat-stable and density mutants of phages T1, T3 and T7.噬菌体T1、T3和T7的热稳定及密度突变体
J Gen Virol. 1970 Oct;9(1):35-43. doi: 10.1099/0022-1317-9-1-35.
6
A physical study by electron microscopy of the terminally reptitious, circularly permuted DNA from the coliphage particles of Escherichia coli 15.对来自大肠杆菌15噬菌体颗粒的末端重复、环状排列的DNA进行电子显微镜下的物理研究。
J Mol Biol. 1970 Feb 28;48(1):1-22. doi: 10.1016/0022-2836(70)90215-9.
7
Heat-stable mutants of T5 phage. I. The physical properties of the phage and their DNA molecules.T5噬菌体的热稳定突变体。I. 噬菌体及其DNA分子的物理性质。
Virology. 1968 Nov;36(3):356-76. doi: 10.1016/0042-6822(68)90161-x.
8
Comparative study of thermal inactivation of phage phi 80 and lambda.噬菌体φ80和λ热失活的比较研究
Virology. 1972 May;48(2):316-22. doi: 10.1016/0042-6822(72)90042-6.
9
Constitutive expression of bacteriophage P2 early genes resulting from a tandem duplication.由串联重复导致的噬菌体P2早期基因的组成型表达。
Proc Natl Acad Sci U S A. 1974 Feb;71(2):315-9. doi: 10.1073/pnas.71.2.315.
10
Tandem duplication in bacteriophage P2: electron microscopic mapping.噬菌体P2中的串联重复:电子显微镜图谱分析
Proc Natl Acad Sci U S A. 1974 Feb;71(2):311-4. doi: 10.1073/pnas.71.2.311.