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海胆非重复DNA的进化

Evolution of sea urchin non-repetitive DNA.

作者信息

Hall T J, Grula J W, Davidson E H, Britten R J

出版信息

J Mol Evol. 1980 Dec;16(2):95-110. doi: 10.1007/BF01731580.

DOI:10.1007/BF01731580
PMID:7463491
Abstract

New methods have been applied to the determination of single copy DNA sequence differences between the sea urchin species Strongylocentrotus purpuratus, S. franciscanus, S. drobachiensis, and Lytechinus pictus. The thermal stability of interspecies DNA duplexes was measured in a solvent (2.4 M tetraethylammonium chloride) that suppresses the effect of base composition on melting temperature. The lengths of duplexes were measured after digestion with S1 nuclease and correction made for the effect of length on thermal stability. The degree of base substitution that has occurred in the single copy DNA during sea urchin evolution is significantly larger than indicated by earlier measurements. We estimate that 19% of the nucleotides of the single copy DNA are different in the genomes of the two sea urchin congeners, S. purpuratus, and S. franciscanus, which apparently diverged only 15 to 20 million years ago.

摘要

新方法已应用于测定紫海胆、加州紫海胆、北方球海胆和刺冠海胆这几种海胆物种之间单拷贝DNA序列的差异。种间DNA双链体的热稳定性是在一种抑制碱基组成对解链温度影响的溶剂(2.4 M 四乙基氯化铵)中测量的。用S1核酸酶消化后测量双链体的长度,并对长度对热稳定性的影响进行校正。在海胆进化过程中,单拷贝DNA中发生的碱基替代程度明显大于早期测量结果所显示的。我们估计,在紫海胆和加州紫海胆这两种明显在仅1500万至2000万年前就分化的海胆同属物种的基因组中,单拷贝DNA的19%的核苷酸是不同的。

相似文献

1
Evolution of sea urchin non-repetitive DNA.海胆非重复DNA的进化
J Mol Evol. 1980 Dec;16(2):95-110. doi: 10.1007/BF01731580.
2
Evolutionary change in the repetition frequency of sea urchin DNA sequences.海胆DNA序列重复频率的进化变化。
Cell. 1978 Oct;15(2):649-60. doi: 10.1016/0092-8674(78)90033-8.
3
The single-copy DNA sequence polymorphism of the sea urchin Strongylocentrotus purpuratus.
Cell. 1978 Dec;15(4):1175-86. doi: 10.1016/0092-8674(78)90044-2.
4
Single copy DNA and structural gene sequence relationships among four sea urchin species.四种海胆物种中单一拷贝DNA与结构基因序列的关系。
Chromosoma. 1976 Jul 8;56(3):213-26. doi: 10.1007/BF00293186.
5
Organization and evolution of the actin gene family in sea urchins.海胆肌动蛋白基因家族的组织与进化
Mol Cell Biol. 1983 Oct;3(10):1824-33. doi: 10.1128/mcb.3.10.1824-1833.1983.
6
Evolutionary conservation of DNA sequences expressed in sea urchin eggs and early embryos.海胆卵和早期胚胎中表达的DNA序列的进化保守性。
J Mol Evol. 1985;22(2):99-107. doi: 10.1007/BF02101688.
7
Evolutionary conservation of DNA coding for maternal RNA in sea urchins.
Biochem Biophys Res Commun. 1984 Aug 30;123(1):278-85. doi: 10.1016/0006-291x(84)90409-1.
8
Sea urchin actin gene subtypes. Gene number, linkage and evolution.海胆肌动蛋白基因亚型。基因数量、连锁与进化。
J Mol Biol. 1984 Jan 15;172(2):149-76. doi: 10.1016/s0022-2836(84)80035-2.
9
Long and short repeats of sea urchin DNA and their evolution.海胆DNA的长短重复序列及其进化
Chromosoma. 1981;84(1):19-32. doi: 10.1007/BF00293360.
10
The evolution of repetitive DNA sequences in sea urchins.海胆中重复DNA序列的进化
Nucleic Acids Res. 1977 Dec;4(12):4425-37. doi: 10.1093/nar/4.12.4425.

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An evolutionary constraint: strongly disfavored class of change in DNA sequence during divergence of cis-regulatory modules.一种进化限制:顺式调控模块分化过程中DNA序列中极不受欢迎的一类变化。
Proc Natl Acad Sci U S A. 2005 Aug 16;102(33):11769-74. doi: 10.1073/pnas.0505291102. Epub 2005 Aug 8.
2
Evolutionary distances in Hawaiian Drosophila measured by DNA reassociation.通过DNA复性测定夏威夷果蝇的进化距离。
J Mol Evol. 1981;17(6):361-7. doi: 10.1007/BF01734358.
3
Single copy DNA homology in sea stars.海星中的单拷贝DNA同源性。

本文引用的文献

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Organization and evolution of the actin gene family in sea urchins.海胆肌动蛋白基因家族的组织与进化
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A program for least squares analysis of reassociation and hybridization data.重缔合和杂交数据的最小二乘法分析程序。
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The evolution of nonrepetitive DNA in sea urchins.海胆中非重复DNA的进化。
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The single-copy DNA sequence polymorphism of the sea urchin Strongylocentrotus purpuratus.
Cell. 1978 Dec;15(4):1175-86. doi: 10.1016/0092-8674(78)90044-2.