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低严格度DNA重缔合:序列特异性双链体形成

Reduced-stringency DNA reassociation: sequence specific duplex formation.

作者信息

Burr H E, Schimke R T

出版信息

Nucleic Acids Res. 1982 Jan 22;10(2):719-33. doi: 10.1093/nar/10.2.719.

DOI:10.1093/nar/10.2.719
PMID:6278429
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC326179/
Abstract

Reduced-stringency DNA reassociation conditions allow low stability duplexes to be detected in prokaryotic, plant, fish, avian, mammalian, and primate genomes. Highly diverged families of sequences can be detected in avian, mouse, and human unique sequence dNAs. Such a family has been described among twelve species of birds; based on species specific melting profiles and fractionation of sequences belonging to this family, it was concluded that permissive reassociation conditions did not artifactually produce low stability structures (1). We report S1 nuclease and optical melting experiments, and further fractionation of the diverged family to confirm sequence specific DNA reassociation at 50 degrees in 0.5 M phosphate buffer.

摘要

降低严格度的DNA重缔合条件可使原核生物、植物、鱼类、鸟类、哺乳动物和灵长类基因组中低稳定性双链体得以检测。在鸟类、小鼠和人类的单拷贝序列DNA中可检测到高度分化的序列家族。在十二种鸟类中已描述了这样一个家族;基于物种特异性解链图谱以及属于该家族序列的分级分离,得出的结论是,宽松的重缔合条件不会人为地产生低稳定性结构(1)。我们报告了S1核酸酶和光学解链实验,以及对该分化家族的进一步分级分离,以证实0.5M磷酸盐缓冲液中50摄氏度时序列特异性DNA重缔合。

相似文献

1
Reduced-stringency DNA reassociation: sequence specific duplex formation.低严格度DNA重缔合:序列特异性双链体形成
Nucleic Acids Res. 1982 Jan 22;10(2):719-33. doi: 10.1093/nar/10.2.719.
2
The reassociation curve of human DNA amended.人类DNA的重新结合曲线已修正。
Biochim Biophys Acta. 1981 Apr 27;653(2):193-203. doi: 10.1016/0005-2787(81)90155-6.
3
Use of S1 nuclease and formamide in combination for the reassociation studies on GC-rich DNA.S1核酸酶与甲酰胺联合用于富含GC的DNA的重缔合研究。
Anal Biochem. 1984 Oct;142(1):53-7. doi: 10.1016/0003-2697(84)90515-3.
4
DNA homology studies in Streptomyces using S1 nuclease.利用S1核酸酶对链霉菌进行DNA同源性研究。
J Antibiot (Tokyo). 1984 Jun;37(6):641-5. doi: 10.7164/antibiotics.37.641.
5
On the heterogeneity of the slow reassociating ("unique") DNA.关于缓慢复性(“单一”)DNA的异质性
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Propidium iodide and S1 nuclease: tools for studying DNA reassociation kinetics.碘化丙啶和S1核酸酶:研究DNA重缔合动力学的工具。
Anal Biochem. 1985 May 1;146(2):423-8. doi: 10.1016/0003-2697(85)90562-7.
7
Contrasting DNA sequence organisation patterns in sauropsidian genomes.蜥形纲基因组中DNA序列组织模式的对比
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8
Internal organization of long repetitive DNA sequences in sea urchin genomes.海胆基因组中长重复DNA序列的内部组织
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Biochemistry. 1980 Apr 29;19(9):1744-55. doi: 10.1021/bi00550a004.
10
Studies on nucleic acid reassociation kinetics: empirical equations describing DNA reassociation.核酸重缔合动力学研究:描述DNA重缔合的经验方程。
Proc Natl Acad Sci U S A. 1976 Feb;73(2):415-9. doi: 10.1073/pnas.73.2.415.

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本文引用的文献

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