Polz M F, Cavanaugh C M
Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.
Proc Natl Acad Sci U S A. 1995 Aug 1;92(16):7232-6. doi: 10.1073/pnas.92.16.7232.
Microbial community structure in natural environments has remained largely unexplored yet is generally considered to be complex. It is shown here that in a Mid-Atlantic Ridge hydrothermal vent habitat, where food webs depend on prokaryotic primary production, the surface microbial community consists largely of only one bacterial phylogenetic type (phylotype) as indicated by the dominance of a single 16S rRNA sequence. The main part of its population occurs as an ectosymbiont on the dominant animals, the shrimp Rimicaris exoculata, where it grows as a monoculture within the carapace and on the extremities. However, the same bacteria are also the major microbial component of the free-living substrate community. Phylogenetically, this type forms a distinct branch within the epsilon-Proteobacteria. This is different from all previously studied chemoautotrophic endo- and ectosymbioses from hydrothermal vents and other sulfidic habitats in which all the bacterial members cluster within the gamma-Proteobacteria.
自然环境中的微生物群落结构在很大程度上仍未得到充分探索,但通常被认为是复杂的。本文表明,在中大西洋海岭热液喷口栖息地,食物网依赖原核生物的初级生产,表面微生物群落主要仅由一种细菌系统发育类型(系统型)组成,这由单一16S rRNA序列的优势所表明。其种群的主要部分作为外共生体存在于优势动物——虾类“Rimicaris exoculata”上,在那里它在虾的甲壳内和肢体上以单一培养物的形式生长。然而,同样的细菌也是自由生活的基质群落的主要微生物成分。从系统发育角度来看,这种类型在ε-变形菌纲内形成一个独特的分支。这与之前所有研究过的来自热液喷口和其他硫化物栖息地的化学自养内共生和外共生不同,在那些研究中,所有细菌成员都聚集在γ-变形菌纲内。