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丹麦牛乳腺炎金黄色葡萄球菌分离株流行病学分型的表型和基因型方法评估

Evaluation of phenotypic and genotypic methods for epidemiological typing of Staphylococcus aureus isolates from bovine mastitis in Denmark.

作者信息

Aarestrup F M, Wegener H C, Rosdahl V T

机构信息

National Veterinary Laboratory, Copenhagen V, Denmark.

出版信息

Vet Microbiol. 1995 Jul;45(2-3):139-50. doi: 10.1016/0378-1135(95)00043-a.

Abstract

The value of five different typing methods (antibiogram typing, biotyping, phage typing, plasmid profiling and restriction fragment length polymorphism of the gene encoding 16S and 23S ribosomal RNA (ribotyping)), in discriminating 105 Staphylococcus aureus strains from bovine milk samples obtained from 105 different Danish dairy herds was investigated. A total of 85 strains (81%) proved susceptible to all of the 11 antibiotics tested, and the remaining 20 strains could be divided into 5 different antibiogram patterns. The predominant resistance pattern, penicillin resistance, was observed in 15 (75%) of the 20 antibiotic resistant strains. Biotyping assigned the strains to 14 different types, with the most common type accounting for 25.7% of the strains. Ninety eight (93.3%) strains could be typed by phages, assigning them to 19 different phage types. The predominant phage type accounted for 31.4% of the strains. Eight different plasmid profiles was observed among 24 (23%) strains harbouring plasmids. Ribotyping yielded 30 different types, with the most common accounting for 29.5% of the strains. The single most discriminatory typing method was ribotyping (0.863) followed by biotyping (0.842) and phage typing (0.795). Plasmid profiling (0.395) and antibiogram typing (0.327) had low discriminatory indices. Correspondence among ribotypes and the presence or absence of plasmids were observed, as was some degree of correspondence between ribotype, phage type and biotype. In general the correspondence between phage type and ribotype were stronger than between biotype and ribotype and between biotype and phage type. All combinations of two or more methods led to an improved index of discrimination compared to the individual methods indicating, that some subdivision of types had taken place. The combination of phage, bio- or ribotyping or all three methods in combination are considered to be an efficient combination of typing methods for epidemiological investigation of S. aureus mastitis.

摘要

研究了五种不同分型方法(抗菌谱分型、生物分型、噬菌体分型、质粒图谱分析以及编码16S和23S核糖体RNA基因的限制性片段长度多态性分析(核糖体分型))对从105个不同丹麦奶牛场采集的牛奶样本中分离出的105株金黄色葡萄球菌的鉴别能力。总共85株(81%)菌株对所测试的11种抗生素均敏感,其余20株可分为5种不同的抗菌谱模式。在20株耐药菌株中,15株(75%)呈现出主要的耐药模式——青霉素耐药。生物分型将这些菌株分为14种不同类型,最常见的类型占菌株总数的25.7%。98株(93.3%)菌株可用噬菌体分型,分为19种不同的噬菌体类型。最主要的噬菌体类型占菌株总数的31.4%。在24株(23%)携带质粒的菌株中观察到8种不同的质粒图谱。核糖体分型产生了30种不同类型,最常见的类型占菌株总数的29.5%。最具鉴别力的单一分型方法是核糖体分型(0.863),其次是生物分型(0.842)和噬菌体分型(0.795)。质粒图谱分析(0.395)和抗菌谱分型(0.327)的鉴别指数较低。观察到核糖体类型与质粒的有无之间存在对应关系,核糖体类型、噬菌体类型和生物类型之间也存在一定程度的对应关系。总体而言,噬菌体类型与核糖体类型之间的对应关系强于生物类型与核糖体类型之间以及生物类型与噬菌体类型之间的对应关系。与单一方法相比,两种或更多方法的所有组合均导致鉴别指数提高,这表明已对类型进行了一些细分。噬菌体分型、生物分型或核糖体分型或这三种方法的组合被认为是用于金黄色葡萄球菌乳腺炎流行病学调查的有效分型方法组合。

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