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正痘病毒基因组中的两种缺失类型。

Two types of deletions in orthopoxvirus genomes.

作者信息

Shchelkunov S N, Totmenin A V

机构信息

Institute of Molecular Biology, Russian State Research Center NPO Vector, Koltsovo, Novosibirsk region.

出版信息

Virus Genes. 1995 Feb;9(3):231-45. doi: 10.1007/BF01702879.

DOI:10.1007/BF01702879
PMID:7597802
Abstract

The genome nucleotide sequences of two strains of variola major virus and one strain of vaccinia virus were compared. One hundred and sixty-eight short (less than 100 bp in length) and eight long (more than 900 bp in length) deletions, four deletion/insertion regions, and four regions of multiple mutational differences between variola and vaccinia virus DNAs were revealed. Short deletions generally occur at directly repeated sequences of 3-21 bp. Long deletions showed no evidence of repeated sequences at their points of junction. We suggest the presence of a consensus sequence characteristic of these junctions and propose that there is a virus-encoded enzyme that produces this nonhomologous recombination/deletion in the cytoplasm of the infected cell.

摘要

对两株天花病毒和一株痘苗病毒的基因组核苷酸序列进行了比较。发现了168个短缺失(长度小于100bp)和8个长缺失(长度大于900bp)、4个缺失/插入区域以及天花病毒和痘苗病毒DNA之间4个多突变差异区域。短缺失通常发生在3 - 21bp的直接重复序列处。长缺失在其连接处没有重复序列的迹象。我们认为这些连接处存在一种共有序列特征,并提出在受感染细胞的细胞质中存在一种病毒编码的酶,该酶会产生这种非同源重组/缺失。

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