• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

硬骨鱼线粒体控制区的结构与进化

Structure and evolution of teleost mitochondrial control regions.

作者信息

Lee W J, Conroy J, Howell W H, Kocher T D

机构信息

Department of Zoology, University of New Hampshire, Durham 03824, USA.

出版信息

J Mol Evol. 1995 Jul;41(1):54-66. doi: 10.1007/BF00174041.

DOI:10.1007/BF00174041
PMID:7608989
Abstract

We amplified and sequenced the mitochondrial control region from 23 species representing six families of teleost fish. The length of this segment is highly variable among even closely related species due to the presence of tandemly repeated sequences and large insertions. The position of the repetitive sequences suggests that they arise during replication both near the origin of replication and at the site of termination of the D-loop strand. Many of the conserved sequence blocks (CSBs) observed in mammals are also found among fish. In particular, the mammalian CSB-D is present in all of the fish species studied. Study of potential secondary structures of RNAs from the conserved regions provides little insight into the functional constraints on these regions. The variable structure of these control regions suggests that particular care should be taken to identify the most appropriate segment for studies of intraspecific variation.

摘要

我们扩增并测序了来自硬骨鱼六个科的23个物种的线粒体控制区。由于存在串联重复序列和大的插入片段,即使是亲缘关系很近的物种,该片段的长度也高度可变。重复序列的位置表明它们在复制过程中出现在复制起点附近和D环链的终止位点。在哺乳动物中观察到的许多保守序列块(CSB)在鱼类中也有发现。特别是,所研究的所有鱼类物种中都存在哺乳动物的CSB-D。对保守区域RNA潜在二级结构的研究几乎没有揭示这些区域的功能限制。这些控制区的可变结构表明,在确定用于种内变异研究的最合适片段时应格外小心。

相似文献

1
Structure and evolution of teleost mitochondrial control regions.硬骨鱼线粒体控制区的结构与进化
J Mol Evol. 1995 Jul;41(1):54-66. doi: 10.1007/BF00174041.
2
Evolution and structural conservation of the control region of insect mitochondrial DNA.昆虫线粒体DNA控制区的进化与结构保守性
J Mol Evol. 1995 Apr;40(4):382-91. doi: 10.1007/BF00164024.
3
Patterns of sequence variation in the mitochondrial D-loop region of shrews.鼩鼱线粒体D环区域的序列变异模式
Mol Biol Evol. 1994 Jan;11(1):9-21. doi: 10.1093/oxfordjournals.molbev.a040096.
4
Organization and evolution of the mitochondrial DNA control region in the avian genus Alectoris.石鸡属鸟类线粒体DNA控制区的组织与进化
J Mol Evol. 1998 Oct;47(4):449-62. doi: 10.1007/pl00006402.
5
Sequence evolution and phylogenetic signal in control-region and cytochrome b sequences of rainbow fishes (Melanotaeniidae).虹银汉鱼科(Melanotaeniidae)鱼类控制区和细胞色素b序列中的序列进化与系统发育信号。
Mol Biol Evol. 1994 Jul;11(4):672-83. doi: 10.1093/oxfordjournals.molbev.a040146.
6
Heteroplasmy in the mtDNA control region of sturgeon (Acipenser, Huso and Scaphirhynchus).鲟鱼(鲟属、鳇属和铲鲟属)线粒体DNA控制区的异质性
Genetics. 2000 Dec;156(4):1933-47. doi: 10.1093/genetics/156.4.1933.
7
[Phylogenetic relationships between 16 species of Lake Baikal sculpin fish based on a nucleotide sequence analysis of a mitochondrial DNA fragment of the cytochrome b gene].基于细胞色素b基因线粒体DNA片段核苷酸序列分析的贝加尔湖杜父鱼16个物种间的系统发育关系
Mol Biol (Mosk). 1995 Jul-Aug;29(4):817-25.
8
Sequences similar to genes for two mitochondrial proteins and portions of ribosomal RNA in tandemly arrayed 6-kilobase-pair DNA of a malarial parasite.疟原虫串联排列的6千碱基对DNA中,与两种线粒体蛋白基因及核糖体RNA部分序列相似的序列。
Mol Biochem Parasitol. 1989 Jun 15;35(2):97-107. doi: 10.1016/0166-6851(89)90112-6.
9
Origin and evolution of homologous repeated sequences in the mitochondrial DNA control region of shrews.鼩鼱线粒体DNA控制区同源重复序列的起源与进化
Mol Biol Evol. 1996 Jan;13(1):31-46. doi: 10.1093/oxfordjournals.molbev.a025568.
10
Unique features in the mitochondrial D-loop region of the European seabass Dicentrarchus labrax.欧洲海鲈(Dicentrarchus labrax)线粒体D环区域的独特特征。
Gene. 1995 Jul 28;160(2):149-55. doi: 10.1016/0378-1119(95)00232-u.

引用本文的文献

1
Mitochondrial DNA analyses of the golden snapper, Lutjanus johnii (Bloch, 1792), revealed two distinct population stocks in the South China Sea and the Strait of Malacca.对紫红笛鲷(Lutjanus johnii,布洛赫,1792年)的线粒体DNA分析显示,在南中国海和马六甲海峡存在两个不同的种群。
Genetica. 2025 Sep 10;153(1):30. doi: 10.1007/s10709-025-00246-3.
2
Mitogenomic Profiling of (Cypriniformes: Cyprinidae) and Its Phylogenetic Placement Within the Clade "Poropuntiinae".(鲤形目:鲤科)的线粒体基因组分析及其在“原魮亚科”分支中的系统发育位置
Ecol Evol. 2025 Aug 13;15(8):e71990. doi: 10.1002/ece3.71990. eCollection 2025 Aug.
3

本文引用的文献

1
PHYLOGENETIC RELATIONSHIPS OF NORTH AMERICAN URSIDS BASED ON ANALYSIS OF MITOCHONDRIAL DNA.基于线粒体DNA分析的北美熊科动物系统发育关系
Evolution. 1991 Feb;45(1):218-221. doi: 10.1111/j.1558-5646.1991.tb05279.x.
2
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.人类和黑猩猩线粒体DNA控制区域核苷酸替换数目的估计。
Mol Biol Evol. 1993 May;10(3):512-26. doi: 10.1093/oxfordjournals.molbev.a040023.
3
The complete nucleotide sequence and gene organization of carp (Cyprinus carpio) mitochondrial genome.
Complete mitogenomes of venomous fish Paracentropogon rubripinnis and Inimicus japonicus elucidate phylogenetic relationships in Scorpaeniformes.
有毒鱼类红鳍副棘鲉和日本鬼鲉的完整线粒体基因组阐明了鲉形目的系统发育关系。
Sci Rep. 2025 Aug 5;15(1):28596. doi: 10.1038/s41598-025-05085-y.
4
Structural Characteristics of Mitochondrial Genomes of Two Species of Mackerel and Phylogenetic Analysis of Scombridae Family.两种鲭鱼线粒体基因组的结构特征及鲭科系统发育分析
Biomolecules. 2025 Apr 9;15(4):555. doi: 10.3390/biom15040555.
5
Annotated Bioinformatic Pipelines for Genome Assembly and Annotation of Mitochondrial Genomes.用于线粒体基因组组装和注释的带注释生物信息学流程
Bio Protoc. 2025 Mar 5;15(5):e5231. doi: 10.21769/BioProtoc.5231.
6
Complete mitochondrial genome of and its phylogenetic status within the family Cobitidae (Cypriniformes).鳅科(鲤形目)某物种的完整线粒体基因组及其系统发育地位
Zookeys. 2024 Dec 10;1221:51-69. doi: 10.3897/zookeys.1221.129136. eCollection 2024.
7
Mitogenomic Architecture of Atlantic Emperor (Actinopterygii: Spariformes): Insights into the Lineage Diversification in Atlantic Ocean.大西洋鲷(硬骨鱼纲:鲈形目)的线粒体基因组结构:对大西洋谱系分化的深入了解。
Int J Mol Sci. 2024 Oct 4;25(19):10700. doi: 10.3390/ijms251910700.
8
Exploring the mitochondrial genomes and phylogenetic relationships of trans-Andean Bryconidae species (Actinopterygii: Ostariophysi: Characiformes).探讨跨安第斯山脉脂鲤科鱼类(硬骨鱼纲:骨鳔总目:鲤形目)的线粒体基因组和系统发育关系。
PLoS One. 2024 Aug 27;19(8):e0300830. doi: 10.1371/journal.pone.0300830. eCollection 2024.
9
Comparison and phylogenetic analysis of the mitochondrial genomes of Synodontis eupterus and Synodontis polli.沙塘鳢和波氏无须魮线粒体基因组的比较及系统进化分析。
Sci Rep. 2024 Jul 4;14(1):15393. doi: 10.1038/s41598-024-65809-4.
10
Complete mitogenome and intra-family comparative mitogenomics showed distinct position of Pama Croaker Otolithoides pama.完整的线粒体基因组和家族内比较线粒体基因组学显示,巴氏石首鱼耳石的位置明显不同。
Sci Rep. 2024 Jun 15;14(1):13820. doi: 10.1038/s41598-024-64791-1.
鲤鱼(Cyprinus carpio)线粒体基因组的完整核苷酸序列及基因组织
J Mol Evol. 1994 Feb;38(2):138-55. doi: 10.1007/BF00166161.
4
Sequence and gene organization of mouse mitochondrial DNA.小鼠线粒体DNA的序列与基因组织
Cell. 1981 Oct;26(2 Pt 2):167-80. doi: 10.1016/0092-8674(81)90300-7.
5
DNA sequence of the Xenopus laevis mitochondrial heavy and light strand replication origins and flanking tRNA genes.非洲爪蟾线粒体重链和轻链复制起点及侧翼tRNA基因的DNA序列。
Nucleic Acids Res. 1983 Jul 25;11(14):4977-95. doi: 10.1093/nar/11.14.4977.
6
Elongation of displacement-loop strands in human and mouse mitochondrial DNA is arrested near specific template sequences.人类和小鼠线粒体DNA中置换环链的延伸在特定模板序列附近停止。
Proc Natl Acad Sci U S A. 1981 Oct;78(10):6116-20. doi: 10.1073/pnas.78.10.6116.
7
Replication of animal mitochondrial DNA.动物线粒体DNA的复制
Cell. 1982 Apr;28(4):693-705. doi: 10.1016/0092-8674(82)90049-6.
8
Identification of primary transcriptional start sites of mouse mitochondrial DNA: accurate in vitro initiation of both heavy- and light-strand transcripts.小鼠线粒体DNA初级转录起始位点的鉴定:重链和轻链转录本的精确体外起始
Mol Cell Biol. 1986 May;6(5):1446-53. doi: 10.1128/mcb.6.5.1446-1453.1986.
9
Sequence deduced physical properties in the D-loop region common to five vertebrate mitochondrial DNAs.
J Theor Biol. 1987 Jan 7;124(1):57-69. doi: 10.1016/s0022-5193(87)80252-7.
10
The neighbor-joining method: a new method for reconstructing phylogenetic trees.邻接法:一种重建系统发育树的新方法。
Mol Biol Evol. 1987 Jul;4(4):406-25. doi: 10.1093/oxfordjournals.molbev.a040454.