• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

Hydroxyl radical footprint analysis of human immunodeficiency virus reverse transcriptase-template.primer complexes.

作者信息

Metzger W, Hermann T, Schatz O, Le Grice S F, Heumann H

机构信息

Max Planck Institute of Biochemistry, Martinsreid, Germany.

出版信息

Proc Natl Acad Sci U S A. 1993 Jul 1;90(13):5909-13. doi: 10.1073/pnas.90.13.5909.

DOI:10.1073/pnas.90.13.5909
PMID:7687057
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC46836/
Abstract

Human immunodeficiency virus type 1 reverse transcriptase protects sugar moieties of a model template.primer DNA in a region from positions +3 to -15 from hydroxyl radical attack. A protected region of equivalent size migrates in concert with the translocating enzyme, as shown by hydroxyl radical footprints of replication complexes after primer extension by 4, 10, and 19 nt. The pattern of these footprints suggests that the DNA template.primer is in the A conformation when complexed with reverse transcriptase. Enhanced accessibility of the DNA template strand around position -15 to hydroxyl radicals indicates a conformational change in the template induced by the C-terminal RNase H-containing domain of p66 reverse transcriptase.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/493c121219c0/pnas01470-0044-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/1696e9831289/pnas01470-0041-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/4e0e591e4c21/pnas01470-0042-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/acc2747a9570/pnas01470-0042-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/31f791681238/pnas01470-0043-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/493c121219c0/pnas01470-0044-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/1696e9831289/pnas01470-0041-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/4e0e591e4c21/pnas01470-0042-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/acc2747a9570/pnas01470-0042-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/31f791681238/pnas01470-0043-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dbe/46836/493c121219c0/pnas01470-0044-a.jpg

相似文献

1
Hydroxyl radical footprint analysis of human immunodeficiency virus reverse transcriptase-template.primer complexes.
Proc Natl Acad Sci U S A. 1993 Jul 1;90(13):5909-13. doi: 10.1073/pnas.90.13.5909.
2
An expanded model of replicating human immunodeficiency virus reverse transcriptase.
Biochemistry. 1995 Apr 25;34(16):5343-56. doi: 10.1021/bi00016a005.
3
Crystal structures of an N-terminal fragment from Moloney murine leukemia virus reverse transcriptase complexed with nucleic acid: functional implications for template-primer binding to the fingers domain.莫洛尼鼠白血病病毒逆转录酶N端片段与核酸复合的晶体结构:模板引物与指状结构域结合的功能意义
J Mol Biol. 2000 Feb 18;296(2):613-32. doi: 10.1006/jmbi.1999.3477.
4
Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA.人类免疫缺陷病毒1型逆转录酶与双链DNA复合物在3.0埃分辨率下的晶体结构显示出弯曲的DNA。
Proc Natl Acad Sci U S A. 1993 Jul 1;90(13):6320-4. doi: 10.1073/pnas.90.13.6320.
5
Mutating a region of HIV-1 reverse transcriptase implicated in tRNA(Lys-3) binding and the consequences for (-)-strand DNA synthesis.对HIV-1逆转录酶中与tRNA(Lys-3)结合相关区域进行突变及其对负链DNA合成的影响。
J Biol Chem. 1998 Jun 5;273(23):14523-32. doi: 10.1074/jbc.273.23.14523.
6
Insights into DNA polymerization mechanisms from structure and function analysis of HIV-1 reverse transcriptase.从HIV-1逆转录酶的结构和功能分析洞察DNA聚合机制。
Biochemistry. 1995 Apr 25;34(16):5351-63. doi: 10.1021/bi00016a006.
7
Truncating alpha-helix E' of p66 human immunodeficiency virus reverse transcriptase modulates RNase H function and impairs DNA strand transfer.截断人类免疫缺陷病毒1型逆转录酶p66亚基的α-螺旋E'可调节核糖核酸酶H功能并损害DNA链转移。
J Biol Chem. 1995 Mar 31;270(13):7068-76. doi: 10.1074/jbc.270.13.7068.
8
Substitution of Asp114 or Arg116 in the fingers domain of moloney murine leukemia virus reverse transcriptase affects interactions with the template-primer resulting in decreased processivity.莫洛尼鼠白血病病毒逆转录酶指状结构域中Asp114或Arg116的取代会影响与模板引物的相互作用,导致持续合成能力下降。
J Mol Biol. 2001 Jan 12;305(2):341-59. doi: 10.1006/jmbi.2000.4281.
9
Alterations to the primer grip of p66 HIV-1 reverse transcriptase and their consequences for template-primer utilization.p66 HIV-1逆转录酶引物结合位点的改变及其对模板-引物利用的影响。
Biochemistry. 1996 Jul 2;35(26):8553-62. doi: 10.1021/bi952773j.
10
Effects of mutations in the polymerase domain on the polymerase, RNase H and strand transfer activities of human immunodeficiency virus type 1 reverse transcriptase.聚合酶结构域突变对1型人类免疫缺陷病毒逆转录酶的聚合酶、核糖核酸酶H及链转移活性的影响
J Mol Biol. 1998 Apr 3;277(3):559-72. doi: 10.1006/jmbi.1998.1624.

引用本文的文献

1
Insights into HIV-1 Reverse Transcriptase (RT) Inhibition and Drug Resistance from Thirty Years of Structural Studies.从三十年的结构研究看 HIV-1 逆转录酶 (RT) 抑制和耐药性。
Viruses. 2022 May 11;14(5):1027. doi: 10.3390/v14051027.
2
Pausing kinetics dominates strand-displacement polymerization by reverse transcriptase.暂停动力学在逆转录酶介导的链置换聚合反应中起主导作用。
Nucleic Acids Res. 2017 Sep 29;45(17):10190-10205. doi: 10.1093/nar/gkx720.
3
Broad-spectrum aptamer inhibitors of HIV reverse transcriptase closely mimic natural substrates.

本文引用的文献

1
Contacts between Escherichia coli RNA polymerase and an early promoter of phage T7.大肠杆菌RNA聚合酶与噬菌体T7早期启动子之间的相互作用。
Proc Natl Acad Sci U S A. 1980 Jan;77(1):122-6. doi: 10.1073/pnas.77.1.122.
2
Mapping of single-stranded regions in duplex DNA at the sequence level: single-strand-specific cytosine methylation in RNA polymerase-promoter complexes.双链DNA中单链区域在序列水平上的定位:RNA聚合酶-启动子复合物中的单链特异性胞嘧啶甲基化
Proc Natl Acad Sci U S A. 1983 May;80(9):2544-8. doi: 10.1073/pnas.80.9.2544.
3
E. coli RNA polymerase interacts homologously with two different promoters.
广谱适体抑制剂能紧密模拟 HIV 逆转录酶的天然底物。
Nucleic Acids Res. 2011 Oct;39(18):8237-47. doi: 10.1093/nar/gkr381. Epub 2011 Jul 3.
4
Slide into action: dynamic shuttling of HIV reverse transcriptase on nucleic acid substrates.迅速行动:HIV逆转录酶在核酸底物上的动态穿梭
Science. 2008 Nov 14;322(5904):1092-7. doi: 10.1126/science.1163108.
5
Interactions between HIV-1 reverse transcriptase and the downstream template strand in stable complexes with primer-template.HIV-1逆转录酶与引物-模板稳定复合物中下游模板链之间的相互作用。
PLoS One. 2008;3(10):e3561. doi: 10.1371/journal.pone.0003561. Epub 2008 Oct 30.
6
Dynamic binding orientations direct activity of HIV reverse transcriptase.动态结合方向指导HIV逆转录酶的活性。
Nature. 2008 May 8;453(7192):184-9. doi: 10.1038/nature06941.
7
Functional roles of carboxylate residues comprising the DNA polymerase active site triad of Ty3 reverse transcriptase.构成Ty3逆转录酶DNA聚合酶活性位点三联体的羧酸盐残基的功能作用。
Nucleic Acids Res. 2005 Jan 12;33(1):171-81. doi: 10.1093/nar/gki150. Print 2005.
8
Specific cleavages by RNase H facilitate initiation of plus-strand RNA synthesis by Moloney murine leukemia virus.核糖核酸酶H的特异性切割促进莫洛尼氏鼠白血病病毒正链RNA合成的起始。
J Virol. 2003 May;77(9):5275-85. doi: 10.1128/jvi.77.9.5275-5285.2003.
9
The tRNA primer activation signal in the human immunodeficiency virus type 1 genome is important for initiation and processive elongation of reverse transcription.人类免疫缺陷病毒1型基因组中的tRNA引物激活信号对于逆转录的起始和持续延伸很重要。
J Virol. 2002 Mar;76(5):2329-39. doi: 10.1128/jvi.76.5.2329-2339.2002.
10
Interference footprinting analysis of telomerase elongation complexes.端粒酶延伸复合体的干涉足迹分析
Mol Cell Biol. 2000 Jun;20(12):4224-37. doi: 10.1128/MCB.20.12.4224-4237.2000.
大肠杆菌RNA聚合酶与两种不同的启动子进行同源性相互作用。
Cell. 1980 Jun;20(2):269-81. doi: 10.1016/0092-8674(80)90613-3.
4
Hydroxyl radical "footprinting": high-resolution information about DNA-protein contacts and application to lambda repressor and Cro protein.羟基自由基“足迹法”:关于DNA-蛋白质相互作用的高分辨率信息及其在λ阻遏蛋白和Cro蛋白中的应用
Proc Natl Acad Sci U S A. 1986 Aug;83(15):5469-73. doi: 10.1073/pnas.83.15.5469.
5
A cinematographic view of Escherichia coli RNA polymerase translocation.
EMBO J. 1989 Sep;8(9):2745-54. doi: 10.1002/j.1460-2075.1989.tb08416.x.
6
Hydroxyl radical footprints reveal novel structural features around the NF I binding site in adenovirus DNA.
Nucleic Acids Res. 1989 Oct 11;17(19):7735-48. doi: 10.1093/nar/17.19.7735.
7
Multiple mutations in HIV-1 reverse transcriptase confer high-level resistance to zidovudine (AZT).HIV-1逆转录酶中的多个突变赋予对齐多夫定(AZT)的高水平耐药性。
Science. 1989 Dec 1;246(4934):1155-8. doi: 10.1126/science.2479983.
8
Point mutations in conserved amino acid residues within the C-terminal domain of HIV-1 reverse transcriptase specifically repress RNase H function.HIV-1逆转录酶C末端结构域内保守氨基酸残基的点突变会特异性抑制核糖核酸酶H的功能。
FEBS Lett. 1989 Nov 6;257(2):311-4. doi: 10.1016/0014-5793(89)81559-5.
9
Topography of intermediates in transcription initiation of E.coli.
EMBO J. 1990 Jul;9(7):2215-20. doi: 10.1002/j.1460-2075.1990.tb07391.x.
10
Human immunodeficiency virus type 1 mutants resistant to nonnucleoside inhibitors of reverse transcriptase arise in tissue culture.在组织培养中出现了对逆转录酶非核苷抑制剂耐药的1型人类免疫缺陷病毒突变体。
Proc Natl Acad Sci U S A. 1991 Dec 15;88(24):11241-5. doi: 10.1073/pnas.88.24.11241.