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一个含有端粒阵列的基因组克隆定位于小鼠6号染色体着丝粒附近。

A genomic clone containing a telomere array maps near the centromere of mouse chromosome 6.

作者信息

Yen C H, Matsuda Y, Chapman V M, Elliott R W

机构信息

Department of Molecular and Cellular Biology, Roswell Park Cancer Institute, New York State Department of Health, Buffalo 14263, USA.

出版信息

Mamm Genome. 1995 Feb;6(2):96-102. doi: 10.1007/BF00303251.

DOI:10.1007/BF00303251
PMID:7767012
Abstract

A lambda clone of mouse DNA containing a short array of telomere hexamers has been localized by FISH to a region close to the centromere of Chromosome (Chr) 6. Amplification of DNA with primers flanking an SSR showed that most inbred strains carry one of two alleles, although five other alleles were found among the inbred strains and 11 other alleles were found in wild-derived mice. Analysis of the DNA from four Robertsonian translocations suggests that the amplified sequence is still present in these chromosomes. The finding of two fragments associated with the Sig mutant suggests that the clone lies within a congenic region created when the mutant, obtained in a (C3H x 101)F1, was backcrossed to C57BL/6J. This region might include all or part of the centromere. Comparison of the segregation of the amplification product with the segregation of centromeric heterochromatin in an interspecies backcross, (C57BL/6 x M. spretus)F1 x M. spretus, (BSS) shows 1/72 recombinants with the centromeric heterochromatin, while 1/62 recombinants occurred in a BSB backcross. Analysis of other loci at the proximal end of Chr 6 gives the combined map Hc6-0.73-D6Mit86-0.73-D6Rp2-2.2-D6Mitl-2.2-Wn t2-3.0-Cpa. Data from a third cross show that Cola2 lies between D6Mit82 and D6Rp2. The portion of the telomere array, Tel-rs3, that has been sequenced contains only 13/31 repeats of the consensus sequence. A variety of sequence changes from the consensus hexamer suggests that this array has been removed for a long time from evolutionary pressures to retain the TTAGGG sequence.

摘要

一个包含短串联端粒六聚体的小鼠DNAλ克隆已通过荧光原位杂交(FISH)定位到靠近6号染色体(Chr)着丝粒的区域。用侧翼于简单序列重复(SSR)的引物扩增DNA表明,大多数近交系携带两个等位基因中的一个,不过在近交系中还发现了其他五个等位基因,在野生衍生小鼠中发现了另外11个等位基因。对四个罗伯逊易位的DNA分析表明,扩增序列仍存在于这些染色体中。与Sig突变体相关的两个片段的发现表明,该克隆位于一个同源区域内,该同源区域是在(C3H×101)F1中获得的突变体与C57BL/6J回交时产生的。该区域可能包括全部或部分着丝粒。在种间回交(C57BL/6×M. spretus)F1×M. spretus(BSS)中,扩增产物的分离与着丝粒异染色质的分离比较显示,与着丝粒异染色质有1/72的重组体,而在BSB回交中有1/62的重组体。对6号染色体近端其他位点的分析给出了组合图谱Hc6 - 0.73 - D6Mit86 - 0.73 - D6Rp2 - 2.2 - D6Mit1 - 2.2 - Wnt2 - 3.0 - Cpa。第三次杂交的数据表明,Cola2位于D6Mit82和D6Rp2之间。已测序的端粒阵列部分Tel - rs3仅包含共有序列的13/31个重复。与共有六聚体相比的各种序列变化表明,该阵列已长期脱离保留TTAGGG序列所需的进化压力。

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引用本文的文献

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An interstitial telomere array proximal to the distal telomere of mouse chromosome 13.小鼠13号染色体远端端粒近端的一个间质端粒阵列。
Mamm Genome. 1997 Jun;8(6):411-7. doi: 10.1007/s003359900458.
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Microsatellite typing of CXB recombinant inbred and parental mouse strains.CXB重组近交系和亲本小鼠品系的微卫星分型
Mamm Genome. 1997 May;8(5):357-61. doi: 10.1007/s003359900441.
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A polymorphic interstitial telomere array near the center of mouse chromosome 8.小鼠8号染色体中心附近的一个多态性间质端粒阵列。

本文引用的文献

1
Typing recombinant inbred mouse strains for microsatellite markers.对重组近交系小鼠品系进行微卫星标记分型。
Mamm Genome. 1993;4(5):239-42. doi: 10.1007/BF00417428.
2
Nucleosomal organization of telomere-specific chromatin in rat.大鼠端粒特异性染色质的核小体组织
Cell. 1993 May 21;73(4):775-87. doi: 10.1016/0092-8674(93)90256-p.
3
Identification of a nonprocessive telomerase activity from mouse cells.从小鼠细胞中鉴定出一种非连续性端粒酶活性。
Mamm Genome. 1996 Mar;7(3):218-21. doi: 10.1007/s003359900059.
Proc Natl Acad Sci U S A. 1993 Feb 15;90(4):1493-7. doi: 10.1073/pnas.90.4.1493.
4
Telomere-like DNA polymorphisms associated with genetic predisposition to acute myeloid leukemia in irradiated CBA mice.与受辐照CBA小鼠急性髓系白血病遗传易感性相关的端粒样DNA多态性
Proc Natl Acad Sci U S A. 1993 Feb 15;90(4):1407-10. doi: 10.1073/pnas.90.4.1407.
5
A "hot spot" of recombination coincides with an interstitial telomeric sequence in the Armenian hamster.在亚美尼亚仓鼠中,一个重组“热点”与一个间质端粒序列重合。
Cytogenet Cell Genet. 1993;62(2-3):169-71. doi: 10.1159/000133464.
6
Acquisition of telomere repeat sequences by transfected DNA integrated at the site of a chromosome break.整合于染色体断裂位点的转染 DNA 获取端粒重复序列。
Mol Cell Biol. 1993 Feb;13(2):977-83. doi: 10.1128/mcb.13.2.977-983.1993.
7
Selective isolation of highly polymorphic (dC-dA)n.(dG-dT)n microsatellites by stringent hybridization.
Genet Anal Tech Appl. 1993 Feb;10(1):2-5. doi: 10.1016/1050-3862(93)90017-d.
8
A Macintosh program for storage and analysis of experimental genetic mapping data.一个用于存储和分析实验性基因图谱数据的麦金塔程序。
Mamm Genome. 1993;4(6):303-13. doi: 10.1007/BF00357089.
9
Interspecific backcrosses provide an important new tool for centromere mapping of mouse chromosomes.种间回交为小鼠染色体的着丝粒作图提供了一种重要的新工具。
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10
In situ analysis of centromere segregation in C57BL/6 x Mus spretus interspecific backcrosses.C57BL/6与小家鼠种间回交中着丝粒分离的原位分析。
Mamm Genome. 1993 Sep;4(9):475-80. doi: 10.1007/BF00364780.