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来自两个种间回交DNA面板的图谱可作为社区遗传图谱资源使用。

Maps from two interspecific backcross DNA panels available as a community genetic mapping resource.

作者信息

Rowe L B, Nadeau J H, Turner R, Frankel W N, Letts V A, Eppig J T, Ko M S, Thurston S J, Birkenmeier E H

机构信息

Jackson Laboratory, Bar Harbor, Maine 04609.

出版信息

Mamm Genome. 1994 May;5(5):253-74. doi: 10.1007/BF00389540.

Abstract

We established two mouse interspecific backcross DNA panels, one containing 94 N2 animals from the cross (C57BL/6J x Mus spretus)F1 x C57BL/6J, and another from 94 N2 animals from the reciprocal backcross (C57BL/6J x SPRET/Ei)F1 x SPRET/Ei. We prepared large quantities of DNA from most tissues of each animal to create a community resource of interspecific backcross DNA for use by laboratories interested in mapping loci in the mouse. Initial characterization of the genetic maps of both panels has been completed. We used MIT SSLP markers, proviral loci, and several other sequence-defined genes to anchor our maps to other published maps. The BSB panel map (from the backcross to C57BL/6J) contains 215 loci and is anchored by 45 SSLP and 32 gene sequence loci. The BSS panel map (from the backcross to SPRET/Ei) contains 451 loci and is anchored by 49 SSLP loci, 43 proviral loci, and 60 gene sequence loci. To obtain a high density of markers, we used motif-primed PCR to "fingerprint" the panel DNAs. We constructed two maps, each representing one of the two panels. All new loci can be located with a high degree of certainty on the maps at current marker density. Segregation patterns in these data reveal several examples of transmission ratio distortion and permit analysis of the distribution of crossovers on individual chromosomes.

摘要

我们建立了两个小鼠种间回交DNA面板,一个包含来自(C57BL/6J×小家鼠)F1×C57BL/6J杂交的94只N2代动物,另一个包含来自反向回交(C57BL/6J×SPRET/Ei)F1×SPRET/Ei的94只N2代动物。我们从每只动物的大多数组织中制备了大量DNA,以创建一个种间回交DNA的社区资源,供对小鼠基因座定位感兴趣的实验室使用。两个面板的遗传图谱的初步表征已经完成。我们使用麻省理工学院的简单序列长度多态性(SSLP)标记、原病毒基因座和其他几个序列定义的基因,将我们的图谱与其他已发表的图谱进行锚定。BSB面板图谱(来自回交至C57BL/6J)包含215个基因座,由45个SSLP和32个基因序列基因座锚定。BSS面板图谱(来自回交至SPRET/Ei)包含451个基因座,由49个SSLP基因座、43个原病毒基因座和60个基因序列基因座锚定。为了获得高密度的标记,我们使用基序引发的聚合酶链反应(PCR)对面板DNA进行“指纹识别”。我们构建了两个图谱,每个图谱代表两个面板中的一个。在当前标记密度下,所有新基因座都可以在图谱上高度准确地定位。这些数据中的分离模式揭示了几个传递比率失真的例子,并允许分析单个染色体上交叉的分布情况。

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