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关于遗传密码起源的推测。

Speculations on the origin of the genetic code.

作者信息

Hartman H

机构信息

Institute for Advanced Studies in Biology, Berkeley, CA 94707, USA.

出版信息

J Mol Evol. 1995 May;40(5):541-4. doi: 10.1007/BF00166623.

DOI:10.1007/BF00166623
PMID:7783228
Abstract

The most primitive code is assumed to be a GC code: GG coding for glycine, CC coding for proline, GC coding for alanine, CG coding for "arginine." The genetic code is assumed to have originated with the coupling of glycine to its anticodon CC mediated by a copper-montmorillonite. The polymerization of polyproline followed when it was coupled to its anticodon GG. In this case the aminoacyl-tRNA synthetase was a copper-montmorillonite. The first membrane is considered to be a beta sheet formed from polyglycine. As the code grew more complicated, the alternative hydrophobic-hydrophilic polypeptide (alanine-"arginine") was coded for by the alternating CG copolymer. This alternating polypeptide (ala-"arg") began to function as both a primitive membrane and as an aminoacyl-tRNA synthetase. The evolution of protein structure is tightly coupled to the evolution of the membrane. The alpha helix was evolved as lipids became part of the structure of biological membranes. The membrane finally became the fluid mosaic structure that is now universal.

摘要

最原始的密码被假定为GC密码:GG编码甘氨酸,CC编码脯氨酸,GC编码丙氨酸,CG编码“精氨酸”。遗传密码被认为起源于由铜蒙脱石介导的甘氨酸与其反密码子CC的偶联。当多聚脯氨酸与其反密码子GG偶联时,随后发生了多聚脯氨酸的聚合。在这种情况下,氨酰-tRNA合成酶是铜蒙脱石。第一个膜被认为是由聚甘氨酸形成的β折叠。随着密码变得更加复杂,交替的疏水-亲水多肽(丙氨酸-“精氨酸”)由交替的CG共聚物编码。这种交替的多肽(ala-“arg”)开始既作为原始膜又作为氨酰-tRNA合成酶发挥作用。蛋白质结构的进化与膜的进化紧密相关。随着脂质成为生物膜结构的一部分,α螺旋得以进化。膜最终变成了现在普遍存在的流体镶嵌结构。

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本文引用的文献

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Speculations on the evolution of the genetic code IV. The evolution of the aminoacyl-tRNA synthetases.关于遗传密码进化的推测IV. 氨酰tRNA合成酶的进化
Orig Life Evol Biosph. 1995 Jun;25(1-3):265-9. doi: 10.1007/BF01581589.
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Liquid water and the origin of life.液态水与生命的起源
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An operational RNA code for amino acids and possible relationship to genetic code.氨基酸的操作性RNA密码及其与遗传密码的可能关系。
从理论最小 RNA 环簇中获得原始 tRNA 受体茎码。
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Codon Directional Asymmetry Suggests Swapped Prebiotic 1st and 2nd Codon Positions.密码子方向不对称性表明前生物的第 1 位和第 2 位密码子位置发生了交换。
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Emergence of a "Cyclosome" in a Primitive Network Capable of Building "Infinite" Proteins.在一个能够构建“无限”蛋白质的原始网络中出现了一种“循环体”。
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More Pieces of Ancient than Recent Theoretical Minimal Proto-tRNA-Like RNA Rings in Genes Coding for tRNA Synthetases.在编码 tRNA 合成酶的基因中,更多的是古老的而不是近代的理论最小原 tRNA 样 RNA 环。
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Hypothesis of Lithocoding: Origin of the Genetic Code as a "Double Jigsaw Puzzle" of Nucleobase-Containing Molecules and Amino Acids Assembled by Sequential Filling of Apatite Mineral Cellules.石编码假说:遗传密码起源于通过磷灰石矿物小室的顺序填充而组装的含核碱基分子和氨基酸的“双拼图”。
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Coevolution Theory of the Genetic Code at Age Forty: Pathway to Translation and Synthetic Life.遗传密码的共进化理论四十载:通向翻译与合成生命之路
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An Interpretation of the Ancestral Codon from Miller's Amino Acids and Nucleotide Correlations in Modern Coding Sequences.基于现代编码序列中米勒氨基酸与核苷酸相关性对祖先密码子的解读
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