Yeo A, Feiss M
Department of Microbiology, University of Iowa, Iowa City 52242.
J Mol Biol. 1995 Jan 13;245(2):141-50. doi: 10.1006/jmbi.1994.0013.
Terminase, the bacteriophage lambda DNA packaging protein, is a heteromultimer of two subunits, gpNu1 and gpA, the products of genes Nu1 and A, resp. Phage 21 is a lambdoid phage that produces a terminase similar to that of lambda terminase, the subunits of 21 terminase, gp1 and gp2, have the same domain structures of their lambda analog, gpNu1 and gpA, respectively. The lambda and 21 terminases have different DNA binding and prohead binding specificities. When the C-terminal 32 amino residues of gpA replace the C-terminal 32 residues of gp2, the resulting chimeric terminase specifically uses lambda proheads, indicating that the C-terminal 32 residues of gpA are a specificity domain for prohead binding. A second chimeric terminase, in which the C-terminal six residues of gpA are replaced by the C-terminal six residues of gp2, is unable to utilize lambda proheads, and a lambda phage producing this terminase, lambda Are636, is unable to form plaques. In the present work, a pseudorevertant of lambda Are636 was isolated that contained a mutation Bms8, affecting the prohead. The B gene encodes the portal protein of lambda proheads, which forms the special vertex that is thought to serve as (1) the site of DNA entry into the prohead during packaging, (2) the site for DNA exit during DNA injection, and (3) the site of tail attachment during virion assembly. Bms8 is predicted to change residue 331 of gpB from proline to serine. Burst size measurements and in vitro DNA packaging experiments demonstrated allele-specific interactions between the Are636 terminase and Bms8 proheads. That is, wild-type terminase interacted more efficiently with wild-type proheads than with Bms8 proheads, and Are636 terminase interacted with Bms8 proheads more efficiently than with wild-type proheads. Prohead binding by lambda terminase is stimulated by an assembly catalyst, gpFI. In vitro packaging extracts lacking gpFI were used under conditions in which packaging was gpFI-independent. In the absence of gpFI, Are636 terminase interacted most efficiently with Bms8 proheads, and wild-type terminase interacted most efficiently with wild-type proheads. The allele-specific interactions in the absence of gpFI indicate that the Are636 and Bms8 mutations affect direct interactions between terminase and the portal protein, rather than acting indirectly by altering the interactions of terminase and gpB and gpFI.
末端酶是噬菌体λ的DNA包装蛋白,是由两个亚基gpNu1和gpA组成的异源多聚体,分别是基因Nu1和A的产物。噬菌体21是一种类λ噬菌体,它产生的末端酶与λ末端酶相似,21末端酶的亚基gp1和gp2分别与其λ类似物gpNu1和gpA具有相同的结构域结构。λ末端酶和21末端酶具有不同的DNA结合和前头部结合特异性。当gpA的C末端32个氨基酸残基取代gp2的C末端32个残基时,产生的嵌合末端酶特异性地使用λ前头部,这表明gpA的C末端32个残基是前头部结合的特异性结构域。第二种嵌合末端酶,其中gpA的C末端6个残基被gp2的C末端6个残基取代,无法利用λ前头部,产生这种末端酶的λ噬菌体λAre636无法形成噬菌斑。在本研究中,分离出了λAre636的一个假回复体,它含有一个影响前头部的突变Bms8。B基因编码λ前头部的门户蛋白,该蛋白形成特殊的顶点,被认为作为(1)包装过程中DNA进入前头部的位点,(2)DNA注射过程中DNA退出的位点,以及(3)病毒体组装过程中尾部附着的位点。预测Bms8会将gpB的331位残基从脯氨酸变为丝氨酸。爆发量测量和体外DNA包装实验证明了Are636末端酶和Bms8前头部之间的等位基因特异性相互作用。也就是说,野生型末端酶与野生型前头部的相互作用比与Bms8前头部更有效,而Are636末端酶与Bms8前头部的相互作用比与野生型前头部更有效。λ末端酶的前头部结合受到组装催化剂gpFI的刺激。在包装不依赖gpFI的条件下,使用缺乏gpFI的体外包装提取物。在没有gpFI的情况下,Are636末端酶与Bms8前头部的相互作用最有效,而野生型末端酶与野生型前头部的相互作用最有效。在没有gpFI的情况下的等位基因特异性相互作用表明,Are636和Bms8突变影响末端酶与门户蛋白之间的直接相互作用,而不是通过改变末端酶与gpB和gpFI的相互作用间接起作用。