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利用稳定同位素辅助的核磁共振研究芽孢杆菌菌株内切葡聚糖酶的活性位点。

A stable isotope-aided NMR study of the active site of an endoglucanase from a strain of Bacillus.

作者信息

Kawaminami S, Ozaki K, Sumitomo N, Hayashi Y, Ito S, Shimada I, Arata Y

机构信息

Biological Science Laboratories, Kao Corporation, Tochigi, Japan.

出版信息

J Biol Chem. 1994 Nov 18;269(46):28752-6.

PMID:7961828
Abstract

Heteronuclear single-quantum coherence two-dimensional NMR spectroscopy has been used to investigate the active site of endoglucanase K (46 kDa) from Bacillus sp. KSM-330, in which Trp are important for expression of the activity. Endoglucanase K, which was specifically labeled with [indole-2-13C]Trp, was prepared from recombinant Bacillus subtilis that carried the gene for this enzyme on an expression vector, pHSP-KC331. Twelve cross-peaks originating from the C-2 position of Trp residues of endoglucanase K were separately observed in 1H-13C heteronuclear single-quantum coherence spectrum, and six of the cross-peaks have been assigned site-specifically by using site-directed mutagenesis. The chemical shifts of the cross-peaks originating from Trp-174 and Trp-243 were affected by the addition of cellotriose that was used as a competitive inhibitor of the enzyme. On the basis of the NMR data obtained after chemical modification of the enzyme by N-bromosuccinimide, it appears that Trp-174 was oxidized first with retention of 56% of the original activity and Trp-243 was then oxidized with complete loss of activity. Substitution of Trp-174 or Trp-243 by Tyr residue caused a decrease in the specific activity of the enzyme to 49 or 8% of that of the wild-type enzyme, respectively. Km values of these mutant enzymes for p-nitrophenyl beta-D-cellotrioside increased to 5 and 8 times those of the wild-type enzyme, respectively, while kcat values of both of the mutant enzymes decreased to one-fifth of those of the wild-type enzymes. These results suggest that Trp-174 and Trp-243 play an important role in binding of the substrate and/or in the catalytic activity.

摘要

异核单量子相干二维核磁共振光谱已被用于研究芽孢杆菌属KSM - 330来源的内切葡聚糖酶K(46 kDa)的活性位点,其中色氨酸对该酶活性的表达很重要。用[吲哚 - 2 - ¹³C]色氨酸特异性标记的内切葡聚糖酶K,是由在表达载体pHSP - KC331上携带该酶基因的重组枯草芽孢杆菌制备的。在¹H - ¹³C异核单量子相干谱中分别观察到12个源自内切葡聚糖酶K色氨酸残基C - 2位置的交叉峰,其中6个交叉峰已通过定点诱变进行了位点特异性归属。源自色氨酸 - 174和色氨酸 - 243的交叉峰的化学位移受纤维三糖添加的影响,纤维三糖用作该酶的竞争性抑制剂。根据用N - 溴代琥珀酰亚胺对该酶进行化学修饰后获得的核磁共振数据,似乎色氨酸 - 174首先被氧化,保留了56%的原始活性,然后色氨酸 - 243被氧化,活性完全丧失。用酪氨酸残基取代色氨酸 - 174或色氨酸 - 243导致该酶的比活性分别降至野生型酶的49%或8%。这些突变酶对对硝基苯基β - D - 纤维三糖苷的Km值分别增加到野生型酶的5倍和8倍,而两种突变酶的kcat值均降至野生型酶的五分之一。这些结果表明色氨酸 - 174和色氨酸 - 243在底物结合和/或催化活性中起重要作用。

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