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仅使用少量经DOP-PCR扩增的显微切割染色体通过反向染色体涂染法描绘标记染色体。

Delineation of marker chromosomes by reverse chromosome painting using only a small number of DOP-PCR amplified microdissected chromosomes.

作者信息

Viersbach R, Schwanitz G, Nöthen M M

机构信息

Institut für Humangenetik, Universität Bonn, Germany.

出版信息

Hum Genet. 1994 Jun;93(6):663-7. doi: 10.1007/BF00201567.

DOI:10.1007/BF00201567
PMID:8005590
Abstract

A new procedure for determining the chromosomal origin of marker chromosomes has been carried out. The origin of marker chromosomes that were unidentifiable by standard banding techniques could be verified by reverse chromosome painting. This technique includes microdissection, followed by in vitro DNA amplification and fluorescence in situ hybridization (FISH). A number of marker chromosomes prepared from unbanded and from GTG-banded lymphocyte chromosomes were collected with microneedles and transferred to a collection drop. The chromosomal material was amplified by a degenerate oligonucleotide-primed polymerase chain reaction (DOP-PCR). The resulting PCR products were labelled by nick-translation with biotin-11-dUTP and used as probes for FISH. They were hybridized onto normal metaphase spreads in order to determine the precise regional chromosomal origin of the markers. Following this approach, we tested 2-14 marker chromosomes in order to determine how many are necessary for reverse chromosome painting. As few as two marker chromosomes provided sufficient material to paint the appropriate chromosome of origin, regardless of whether the marker contained heterochromatic or mainly euchromatic material. With this method, it was possible to identify two marker chromosomes of a healthy proband [karyotype: 48,XY,+mar1,+mar2] and an aberrant Y chromosome of a mentally retarded boy [karyotype: 46,X, der(Y)].

摘要

一种确定标记染色体染色体来源的新方法已经实施。通过标准显带技术无法识别的标记染色体的来源可以通过反向染色体涂染来验证。该技术包括显微切割,随后进行体外DNA扩增和荧光原位杂交(FISH)。用微针收集从未显带和GTG显带的淋巴细胞染色体制备的一些标记染色体,并转移到收集滴中。通过简并寡核苷酸引物聚合酶链反应(DOP-PCR)扩增染色体物质。所得的PCR产物用生物素-11-dUTP进行缺口平移标记,并用作FISH探针。将它们杂交到正常中期染色体铺片上,以确定标记的精确区域染色体来源。按照这种方法,我们检测了2 - 14条标记染色体,以确定反向染色体涂染需要多少条。少至两条标记染色体就能提供足够的材料来涂染相应的起源染色体,无论该标记包含异染色质还是主要为常染色质物质。用这种方法,可以鉴定出一名健康先证者的两条标记染色体[核型:48,XY,+mar1,+mar2]和一名智力发育迟缓男孩的一条异常Y染色体[核型:46,X, der(Y)]。

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本文引用的文献

1
Generation of band-specific painting probes from a single microdissected chromosome.从单个显微切割染色体生成带特异性绘画探针。
Hum Mol Genet. 1993 Aug;2(8):1117-21. doi: 10.1093/hmg/2.8.1117.
2
Clinical findings in patients with marker chromosomes identified by fluorescence in situ hybridization.通过荧光原位杂交鉴定出具有标记染色体的患者的临床发现。
Hum Genet. 1993 Jul;91(6):589-98. doi: 10.1007/BF00205086.
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Inherited structural cytogenetic abnormalities detected incidentally in fetuses diagnosed prenatally: frequency, parental-age associations, sex-ratio trends, and comparisons with rates of mutants.
通过显微切割和荧光原位杂交技术揭示复杂染色体重排中的五个断点
J Med Genet. 1996 Jul;33(7):562-6. doi: 10.1136/jmg.33.7.562.
4
Tetrasomy 18p de novo: identification by FISH with conventional and microdissection probes and analysis of parental origin and formation by short sequence repeat typing.新发18号染色体短臂四体:采用常规和显微切割探针进行荧光原位杂交鉴定,并通过短串联重复序列分型分析亲本来源和形成机制。
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Complete and precise characterization of marker chromosomes by application of microdissection in prenatal diagnosis.通过显微切割技术在产前诊断中对标记染色体进行完整而精确的特征描述。
Hum Genet. 1995 Dec;96(6):661-7. doi: 10.1007/BF00210295.
6
Mechanisms of small ring formation suggested by the molecular characterization of two small accessory ring chromosomes derived from chromosome 4.由两条源自4号染色体的小的附加环状染色体的分子特征所提示的小环形成机制。
Am J Hum Genet. 1995 Nov;57(5):1137-42.
产前诊断胎儿中偶然发现的遗传性结构细胞遗传学异常:频率、父母年龄关联、性别比例趋势以及与突变率的比较。
Am J Hum Genet. 1984 Mar;36(2):422-43.
4
Recent evolution of DNA sequence homology in the pericentromeric regions of human acrocentric chromosomes.人类近端着丝粒染色体着丝粒周围区域DNA序列同源性的最新演变
Cytogenet Cell Genet. 1984;38(2):99-105. doi: 10.1159/000132039.
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Forty four probands with an additional "marker" chromosome.44名携带额外“标记”染色体的先证者。
Hum Genet. 1985;69(4):353-70. doi: 10.1007/BF00291656.
6
Cytogenetic analysis using quantitative, high-sensitivity, fluorescence hybridization.使用定量、高灵敏度荧光杂交技术的细胞遗传学分析。
Proc Natl Acad Sci U S A. 1986 May;83(9):2934-8. doi: 10.1073/pnas.83.9.2934.
7
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Chromosoma. 1988;96(6):443-53. doi: 10.1007/BF00303039.
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Cytogenet Cell Genet. 1988;48(1):60-2. doi: 10.1159/000132588.
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