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一种与紫海胆线粒体DNA的双链和单链序列结合的线粒体DNA结合蛋白的纯化与特性分析

Purification and characterization of a mitochondrial DNA-binding protein that binds to double-stranded and single-stranded sequences of Paracentrotus lividus mitochondrial DNA.

作者信息

Polosa P L, Roberti M, Mustich A, Gadaleta M N, Cantatore P

机构信息

Dipartimento di Biochimica e Biologia Molecolare, Università di Bari, Italy.

出版信息

Curr Genet. 1994 Apr;25(4):350-6. doi: 10.1007/BF00351489.

DOI:10.1007/BF00351489
PMID:8082178
Abstract

A mitochondrial protein, able to specifically bind two double-stranded homologous sequences of sea-urchin mitochondrial DNA, has been partially purified from Paracentrotus lividus eggs. This protein, present at a low concentration, is a polypeptide of 40 kDa. One of the binding sequences, located in the main non-coding region, contains the replication origin of the mitochondrial DNA H-strand. By a combination of band-shift, DNase footprinting, and modification interference analyses with homologous and heterologous probes we identified YCYYATCAN(A/T)RC as the minimum sequence required for the binding. The protein also shows a single-stranded DNA-binding activity, as it is able to specifically interact with one of the strands of the binding sites. These features are consistent with a function of the protein in the modulation of sea-urchin mitochondrial DNA replication during the development stages.

摘要

一种能够特异性结合海胆线粒体DNA两条双链同源序列的线粒体蛋白已从地中海海胆卵中部分纯化出来。这种蛋白浓度较低,是一种40 kDa的多肽。其中一个结合序列位于主要非编码区,包含线粒体DNA H链的复制起点。通过结合使用带移分析、DNA酶足迹分析以及对同源和异源探针的修饰干扰分析,我们确定YCYYATCAN(A/T)RC为结合所需的最小序列。该蛋白还表现出单链DNA结合活性,因为它能够与结合位点的其中一条链特异性相互作用。这些特性与该蛋白在海胆发育阶段调节线粒体DNA复制中的功能相一致。

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引用本文的文献

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Sea urchin mtDBP is a two-faced transcription termination factor with a biased polarity depending on the RNA polymerase.海胆线粒体DNA结合蛋白(mtDBP)是一种具有两面性的转录终止因子,其极性偏向取决于RNA聚合酶。
Nucleic Acids Res. 2001 Nov 15;29(22):4736-43. doi: 10.1093/nar/29.22.4736.
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Precise sequence assignment of replication origin in the control region of chick mitochondrial DNA relative to 5' and 3' D-loop ends, secondary structure, DNA synthesis, and protein binding.

本文引用的文献

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Protein binding to a single termination-associated sequence in the mitochondrial DNA D-loop region.蛋白质与线粒体DNA D环区域中单个终止相关序列的结合。
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Affinity purification of sequence-specific DNA binding proteins.序列特异性DNA结合蛋白的亲和纯化
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