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链霉菌插入序列IS493的超转座衍生物

Hypertransposing derivatives of the streptomycete insertion sequence IS493.

作者信息

Solenberg P J, Baltz R H

机构信息

Lilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN 46285.

出版信息

Gene. 1994 Sep 15;147(1):47-54. doi: 10.1016/0378-1119(94)90037-x.

DOI:10.1016/0378-1119(94)90037-x
PMID:8088548
Abstract

Transposons derived from the Streptomyces lividans insertion sequence IS493 are useful for the genetic analysis and manipulation of a number of Streptomyces spp. Tn5099-10, an IS493 derivative that contains a spontaneous deletion terminating in the left inverted repeat (IR-L), transposed at a 1000-fold higher frequency in Streptomyces griseofuscus, and at a tenfold higher frequency in Streptomyces fradiae, than the IS493 derivatives, Tn5096 and Tn5099. The IR-L from Tn5099-10 was used to construct a cassette which hypertransposes from plasmids containing the transposon genes, ORFA and ORFB, outside of the inverted repeats. The target sequences of two Tn5099-10 insertions conformed to the consensus target sequence of the other IS493 derivatives, gNCaNTgNNy (where lower-case letters indicate that other nt have been observed at this position and N is any nt). Transposition mutant libraries of S. griseofuscus and S. fradiae can be easily prepared in broth culture by using the hypertransposing elements and a temperature-sensitive delivery plasmid.

摘要

源自淡紫灰链霉菌插入序列IS493的转座子,可用于多种链霉菌属细菌的遗传分析和操作。Tn5099 - 10是一种IS493衍生物,含有一个终止于左侧反向重复序列(IR - L)的自发缺失,其在灰褐链霉菌中的转座频率比IS493衍生物Tn5096和Tn5099高1000倍,在弗氏链霉菌中的转座频率高10倍。来自Tn5099 - 10的IR - L被用于构建一个盒式结构,该结构可从含有位于反向重复序列之外的转座子基因ORFA和ORFB的质粒上进行高效转座。两个Tn5099 - 10插入的靶序列符合其他IS493衍生物的共有靶序列gNCaNTgNNy(其中小写字母表示在该位置观察到了其他核苷酸,N为任意核苷酸)。通过使用高效转座元件和温度敏感型传递质粒,可在肉汤培养中轻松制备灰褐链霉菌和弗氏链霉菌的转座突变体文库。

相似文献

1
Hypertransposing derivatives of the streptomycete insertion sequence IS493.链霉菌插入序列IS493的超转座衍生物
Gene. 1994 Sep 15;147(1):47-54. doi: 10.1016/0378-1119(94)90037-x.
2
Transposition of Tn5096 and related transposons in Streptomyces species.Tn5096及相关转座子在链霉菌属中的转位
Gene. 1992 Jun 15;115(1-2):61-5. doi: 10.1016/0378-1119(92)90541-v.
3
Transposition and transduction of plasmid DNA in Streptomyces spp.链霉菌属中质粒DNA的转位与转导
J Ind Microbiol. 1991 Jun;7(4):229-34. doi: 10.1007/BF01577649.
4
Transposition of Tn5096 and other IS493 derivatives in Streptomyces griseofuscus.Tn5096及其他IS493衍生物在浅灰链霉菌中的转座。
J Bacteriol. 1991 Feb;173(3):1096-104. doi: 10.1128/jb.173.3.1096-1104.1991.
5
Tn5099, a xylE promoter probe transposon for Streptomyces spp.Tn5099,一种用于链霉菌属的木糖操纵子E启动子探针转座子
J Bacteriol. 1991 Sep;173(17):5573-7. doi: 10.1128/jb.173.17.5573-5577.1991.
6
Applications of transposition mutagenesis in antibiotic producing streptomycetes.转座诱变在抗生素产生链霉菌中的应用。
Antonie Van Leeuwenhoek. 1997 Feb;71(1-2):179-87. doi: 10.1023/a:1000177808686.
7
Method for selection of transposable DNA and characterization of a new insertion sequence, IS493, from Streptomyces lividans.从淡紫链霉菌中筛选转座DNA及鉴定新插入序列IS493的方法。
J Bacteriol. 1989 Sep;171(9):4807-13. doi: 10.1128/jb.171.9.4807-4813.1989.
8
Transposition of Tn5096 from a temperature-sensitive transducible plasmid in Streptomyces spp.Tn5096从链霉菌属中一种温度敏感型可转导质粒的转座
J Bacteriol. 1991 Sep;173(17):5578-81. doi: 10.1128/jb.173.17.5578-5581.1991.
9
Gene transfer and transposition mutagenesis in Streptomyces roseosporus: mapping of insertions that influence daptomycin or pigment production.玫瑰孢链霉菌中的基因转移和转座诱变:影响达托霉素或色素产生的插入位点定位
Microbiology (Reading). 1996 Sep;142 ( Pt 9):2363-73. doi: 10.1099/00221287-142-9-2363.
10
Transposition mutagenesis in Streptomyces fradiae: identification of a neutral site for the stable insertion of DNA by transposon exchange.弗氏链霉菌中的转座诱变:通过转座子交换鉴定用于DNA稳定插入的中性位点。
Gene. 1996 Feb 2;168(1):67-72. doi: 10.1016/0378-1119(95)00765-2.

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J Ind Microbiol Biotechnol. 2010 Aug;37(8):759-72. doi: 10.1007/s10295-010-0730-9. Epub 2010 May 14.
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来自玫瑰孢链霉菌的达托霉素基因簇的分子克隆与物理图谱分析
J Bacteriol. 1998 Jan;180(1):143-51. doi: 10.1128/JB.180.1.143-151.1998.
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Use of rpsL for dominance selection and gene replacement in Streptomyces roseosporus.利用rpsL在玫瑰孢链霉菌中进行显性选择和基因置换。
J Bacteriol. 1997 Jan;179(1):180-6. doi: 10.1128/jb.179.1.180-186.1997.