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含三叶基序的细胞生长因子——猪解痉蛋白的溶液结构

Solution structure of a trefoil-motif-containing cell growth factor, porcine spasmolytic protein.

作者信息

Carr M D, Bauer C J, Gradwell M J, Feeney J

机构信息

Laboratory of Molecular Structure, National Institute for Medical Research, London, England.

出版信息

Proc Natl Acad Sci U S A. 1994 Mar 15;91(6):2206-10. doi: 10.1073/pnas.91.6.2206.

DOI:10.1073/pnas.91.6.2206
PMID:8134374
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC43339/
Abstract

The porcine spasmolytic protein (pSP) is a 106-residue cell growth factor that typifies a family of eukaryotic proteins that contain at least one copy of an approximately 40-amino acid protein domain known as the trefoil motif. In fact, pSP contains two highly homologous trefoil domains. We have determined the complete three-dimensional solution structure of pSP by using a combination of two- and three-dimensional 1H NMR spectroscopy and distance geometry calculations. pSP is a relatively elongated molecule, consisting of two compact globular domains joined via a small interface. The protein's two trefoil domains adopt the same tertiary structure and contain a core C-terminal two-stranded antiparallel beta-sheet, preceded by a 6-residue helix that packs against the N-terminal beta-strand. The remainder of the protein backbone is taken up by two short loops that lie on either side of the beta-hairpin and are linked by an extended region that wraps around the C-terminal beta-strand. The topology of the protein backbone observed for the trefoil domains in pSP represents an unusual polypeptide fold. A striking feature of both trefoil domains is a surface patch formed from five conserved residues that have no obvious structural role. The two patches are located at the far ends of the protein molecule, and we propose that these residues form at least part of the receptor binding site, or sites, on pSP.

摘要

猪解痉蛋白(pSP)是一种由106个氨基酸残基组成的细胞生长因子,代表了一类真核蛋白家族,这类蛋白至少含有一个约40个氨基酸的蛋白结构域拷贝,即三叶基序。事实上,pSP包含两个高度同源的三叶结构域。我们通过结合二维和三维1H NMR光谱以及距离几何计算,确定了pSP完整的三维溶液结构。pSP是一个相对细长的分子,由两个紧密的球状结构域通过一个小界面连接而成。该蛋白的两个三叶结构域具有相同的三级结构,包含一个核心的C端双链反平行β-折叠,前面有一个6个氨基酸残基的螺旋,该螺旋与N端β-链堆积在一起。蛋白质主链的其余部分由位于β-发夹两侧的两个短环组成,并由一个围绕C端β-链的延伸区域连接。在pSP中观察到的三叶结构域的蛋白质主链拓扑结构代表了一种不寻常的多肽折叠。两个三叶结构域的一个显著特征是由五个保守残基形成的表面斑块,这些残基没有明显的结构作用。这两个斑块位于蛋白质分子的远端,我们认为这些残基至少构成了pSP上受体结合位点的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a0e/43339/74876f33b4be/pnas01128-0237-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a0e/43339/2203180d2b3d/pnas01128-0236-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a0e/43339/a0ef37ff9f06/pnas01128-0237-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a0e/43339/74876f33b4be/pnas01128-0237-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a0e/43339/2203180d2b3d/pnas01128-0236-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a0e/43339/a0ef37ff9f06/pnas01128-0237-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a0e/43339/74876f33b4be/pnas01128-0237-b.jpg

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本文引用的文献

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三叶因子家族结构域是N-连接的N,N'-二-N-乙酰乳糖二胺(LacdiNAc)合成的高效构象决定因素。
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