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利用数值酶分类法对新大陆利什曼原虫进行的一般分类。

A general classification of New World Leishmania using numerical zymotaxonomy.

作者信息

Cupolillo E, Grimaldi G, Momen H

机构信息

Departamento de Bioquimica e Biologia Molecular, Instituto Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil.

出版信息

Am J Trop Med Hyg. 1994 Mar;50(3):296-311. doi: 10.4269/ajtmh.1994.50.296.

Abstract

More than 250 strains of Leishmania isolated from different localities and hosts in the New World were analyzed by enzyme electrophoresis, and their electromorphic profiles were compared with 19 reference strains representing most of the described species of this parasite. The 18 enzymic loci analyzed were very polymorphic, and the strains were classified into 44 zymodemes, each grouping strains with the same enzyme profiles. Each zymodeme was considered as an elementary taxon and the phenetic and phylogenetic relationships were determined by agglomerative hierarchical, ordination, and cladistic techniques. The different classification methods produced very similar results. The 44 zymodemes could be clustered into two groups, corresponding to the subgenera Leishmania and Viannia, by the numerical methods. The subgenus Viannia was shown to be monophyletic and could be further divided into species complexes representing L. braziliensis, L. naiffi, and L. guyanensis/L. panamensis/L. shawi, as well as some isolated taxa including L. lainsoni. The subgenus Leishmania, on the other hand, was polyphyletic, with New World isolates related to L. major clustered separately from the L. mexicana species complex. Most of the other zymodemes in this group represented independent taxa. The results confirm Viannia as a valid taxon but suggest that the status of the subgenus Leishmania should be further investigated. Leishmania braziliensis and L. naiffi were shown to be the most polymorphic species, while L. guyanensis, in spite of being the most common species found in this study, was remarkably homogeneous. The only variants were found south of the Amazon river. North of this river, the species was monomorphic.

摘要

通过酶电泳分析了从新世界不同地区和宿主分离出的250多种利什曼原虫菌株,并将它们的电形态图谱与代表该寄生虫大多数已描述物种的19个参考菌株进行了比较。所分析的18个酶位点具有很高的多态性,这些菌株被分为44个酶型,每个酶型将具有相同酶谱的菌株归为一组。每个酶型被视为一个基本分类单元,并通过凝聚层次法、排序法和分支法确定表型和系统发育关系。不同的分类方法产生了非常相似的结果。通过数值方法,44个酶型可聚类为两组,分别对应利什曼原虫亚属和维阿尼原虫亚属。维阿尼原虫亚属显示为单系,可进一步分为代表巴西利什曼原虫、奈菲利什曼原虫和圭亚那利什曼原虫/巴拿马利什曼原虫/沙维利什曼原虫的物种复合体,以及一些孤立的分类单元,包括兰氏利什曼原虫。另一方面,利什曼原虫亚属是多系的,与硕大利什曼原虫相关的新世界分离株与墨西哥利什曼原虫物种复合体分开聚类。该组中的大多数其他酶型代表独立的分类单元。结果证实维阿尼原虫亚属是一个有效的分类单元,但表明利什曼原虫亚属的地位应进一步研究。巴西利什曼原虫和奈菲利什曼原虫是多态性最高的物种,而圭亚那利什曼原虫尽管是本研究中最常见的物种,但非常同质。唯一的变种发现于亚马逊河以南。在这条河以北,该物种是单态的。

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