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立方胰岛素晶体中的多个水化层。

Multiple hydration layers in cubic insulin crystals.

作者信息

Badger J

机构信息

Rosenstiel Basic Medical Sciences Research Center, Brandeis University, Waltham, Massachusetts 02254.

出版信息

Biophys J. 1993 Oct;65(4):1656-9. doi: 10.1016/S0006-3495(93)81220-7.

Abstract

Cubic insulin crystals contain approximately 30-A-diameter channels filled with aqueous solvent, providing a useful system in which to analyze hydration structure at a variety of distances from protein surfaces. Beginning with an atomic model for the protein and ordered water molecules, the density distribution in the solvent volume of the phasing model was iteratively refined to improve the fit of calculated structure factors with x-ray diffraction data. The free R value, which compares calculated structure factors with a subset of observed structure factors deliberately omitted from the refinement, was used to provide an objective confirmation of the effectiveness of the refinement procedure. Electron density maps of the solvent, computed using the solvent-refined phases and complete low-resolution diffraction data, reveal multiple hydration layers around the protein.

摘要

立方胰岛素晶体含有直径约30埃的通道,里面充满了水性溶剂,这为分析距蛋白质表面不同距离处的水合结构提供了一个有用的系统。从蛋白质和有序水分子的原子模型开始,对相位模型溶剂体积中的密度分布进行迭代精修,以提高计算的结构因子与X射线衍射数据的拟合度。自由R值用于客观确认精修过程的有效性,该值将计算的结构因子与精修过程中故意省略的一部分观测结构因子进行比较。使用经溶剂精修的相位和完整的低分辨率衍射数据计算得到的溶剂电子密度图,揭示了蛋白质周围的多个水合层。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ac7/1225891/7de58e639168/biophysj00083-0304-a.jpg

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