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接合转座子Tn916左侧4kb的特性分析:参与切除的决定因素

Characterization of the left 4 kb of conjugative transposon Tn916: determinants involved in excision.

作者信息

Su Y A, Clewell D B

机构信息

Department of Biologic and Materials Sciences, School of Dentistry, University of Michigan, Ann Arbor 48109.

出版信息

Plasmid. 1993 Nov;30(3):234-50. doi: 10.1006/plas.1993.1055.

Abstract

The rate-limiting step in movement of the conjugative transposon Tn916, originally identified in Enterococcus faecalis, is believed to be an excision event that generates a non-replicative circular intermediate. When present on a plasmid vector in Escherichia coli, Tn916 generally excises at a high frequency. It was reported previously that insertion of Tn5 in a region near the left end of Tn916 eliminated the ability to excise; and the mutation could be complemented in trans. In this communication the nucleotide sequence of 4 kb of Tn916 DNA connecting the recently sequenced tet(M) determinant (Su et al., 1992; Burdett, 1990) with the left end of the transposon. Ten open reading frames (ORFs) were deduced, two of which (ORF3 and ORF4) were encoded in-frame within a third (ORF2). Mutants with Tn5 insertions in the ORF1 or ORF2 (ORF3 and ORF4) were defective in excision, but could be complemented in vivo by a co-resident plasmid containing the ORF1 or ORF2 determinant, respectively. The data support the view that both ORF1 and ORF2 are essential for excision. ORF1 and ORF2 are essentially identical to determinants designated xis-Tn and int-Tn, respectively, in the closely related Tn1545. A Tn5 insertion in ORF5 eliminated conjugative transfer between E. faecalis strains. Functions for the remaining ORFs (ORF6 through ORF10) remain unknown; however, nucleotide sequences within ORF6 and ORF9 had significant homology with sequence downstream of other tet(M) determinants.

摘要

接合转座子Tn916的移动限速步骤最初是在粪肠球菌中发现的,据信这是一个产生非复制性环状中间体的切除事件。当Tn916存在于大肠杆菌的质粒载体上时,它通常会高频切除。此前有报道称,在Tn916左端附近区域插入Tn5会消除其切除能力;并且该突变可以通过反式互补。在本通讯中,连接最近测序的tet(M)决定簇(Su等人,1992年;Burdett,1990年)与转座子左端的4 kb Tn916 DNA的核苷酸序列被测定。推导了10个开放阅读框(ORF),其中两个(ORF3和ORF4)在第三个(ORF2)内框内编码。在ORF1或ORF2(ORF3和ORF4)中插入Tn5的突变体在切除方面存在缺陷,但分别可以被含有ORF1或ORF2决定簇的共居质粒在体内互补。这些数据支持ORF1和ORF2对于切除都是必需的这一观点。ORF1和ORF2分别与密切相关的Tn1545中指定为xis-Tn和int-Tn的决定簇基本相同。在ORF5中插入Tn5消除了粪肠球菌菌株之间的接合转移。其余ORF(ORF6至ORF10)的功能仍然未知;然而,ORF6和ORF9内的核苷酸序列与其他tet(M)决定簇下游的序列具有显著同源性。

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