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蛋白质因子与酸性烟草病程相关蛋白1基因(PR-1)的两个独立启动子区域的序列特异性结合。

Sequence-specific binding of protein factors to two independent promoter regions of the acidic tobacco pathogenesis-related-1 protein gene (PR-1).

作者信息

Hagiwara H, Matsuoka M, Ohshima M, Watanabe M, Hosokawa D, Ohashi Y

机构信息

Faculty of Agriculture, Tokyo University of Agriculture and Technology, Japan.

出版信息

Mol Gen Genet. 1993 Aug;240(2):197-205. doi: 10.1007/BF00277057.

DOI:10.1007/BF00277057
PMID:8355654
Abstract

Gel shift mobility analysis, using the proximal 0.3 kb fragment of the tobacco pathogenesis-related protein 1a gene (PR-1a) and nuclear extracts from healthy Samsun NN tobacco leaves, which do not produce PR-1 proteins, showed a broad shifted signal with low mobility. This signal was not detected with nuclear proteins from the interspecific hybrid of Nicotiana glutinosa x Nicotiana debneyi, which constitutively produces the PR-1a protein. Similar shifted signals were detected with both proximal and distal regions of the 0.3 kb fragment using nuclear proteins from healthy Samsun NN tobacco, but not with proteins from the interspecific hybrid. Further experiments, performed using 5' or 3' truncated fragments of the 0.3 kb fragment, identified two independent binding sites: a distal site between -179 and -168 bp from the transcription start site, and a proximal site between -61 and -37 bp. Footprint analysis revealed two protected sequences, a distal region between -184 and -172 bp, and a proximal region between -68 and -51 bp. These results indicate the presence of regulatory factor(s) for expression of the acidic PR-1a gene. The possibility of negative regulation of the gene is discussed.

摘要

凝胶迁移率变动分析使用烟草病程相关蛋白1a基因(PR-1a)近端0.3 kb片段以及不产生PR-1蛋白的健康三生NN烟草叶片的核提取物,结果显示出一个迁移率低的宽迁移信号。在用本氏烟草×德氏烟草的种间杂种的核蛋白进行检测时未检测到该信号,该种间杂种组成型产生PR-1a蛋白。使用健康三生NN烟草的核蛋白对0.3 kb片段的近端和远端区域进行检测时均检测到了类似的迁移信号,但使用种间杂种的蛋白则未检测到。使用0.3 kb片段的5'或3'截短片段进行的进一步实验确定了两个独立的结合位点:一个位于转录起始位点上游-179至-168 bp之间的远端位点,以及一个位于-61至-37 bp之间的近端位点。足迹分析揭示了两个受保护序列,一个位于-184至-172 bp之间的远端区域,以及一个位于-68至-51 bp之间的近端区域。这些结果表明存在酸性PR-1a基因表达的调控因子。文中还讨论了该基因负调控的可能性。

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引用本文的文献

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2
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3
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本文引用的文献

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Pathogenesis-related proteins.病程相关蛋白
Plant Mol Biol. 1985 Mar;4(2-3):111-6. doi: 10.1007/BF02418757.
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Site-specific binding of a nuclear factor to the carrot extensin gene is influenced by both ethylene and wounding.核因子与胡萝卜伸展蛋白基因的位点特异性结合受乙烯和损伤的双重影响。
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一个类as-1基序控制烟草病程相关蛋白1a基因的表达水平。
Plant Mol Biol. 1998 Jul;37(5):871-83. doi: 10.1023/a:1006003916284.
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The PR-1a promoter contains a number of elements that bind GT-1-like nuclear factors with different affinity.PR-1a启动子包含许多能以不同亲和力与GT-1样核因子结合的元件。
Plant Mol Biol. 1996 Feb;30(3):493-504. doi: 10.1007/BF00049327.
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The salicylic acid signal in plants.植物中的水杨酸信号。
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Salicylic Acid: a likely endogenous signal in the resistance response of tobacco to viral infection.水杨酸:烟草抗病毒感染抗性反应中的一种可能的内源性信号。
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Coordinate Gene Activity in Response to Agents That Induce Systemic Acquired Resistance.响应诱导系统获得性抗性的因子协调基因活性
Plant Cell. 1991 Oct;3(10):1085-1094. doi: 10.1105/tpc.3.10.1085.
6
Identification of a soluble salicylic acid-binding protein that may function in signal transduction in the plant disease-resistance response.一种可能在植物抗病反应信号转导中发挥作用的可溶性水杨酸结合蛋白的鉴定。
Proc Natl Acad Sci U S A. 1991 Sep 15;88(18):8179-83. doi: 10.1073/pnas.88.18.8179.
7
Sequencing end-labeled DNA with base-specific chemical cleavages.通过碱基特异性化学切割对末端标记的DNA进行测序。
Methods Enzymol. 1980;65(1):499-560. doi: 10.1016/s0076-6879(80)65059-9.
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Nucleotide sequence of the PR-1 gene of Nicotiana tabacum.烟草PR-1基因的核苷酸序列。
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EMBO J. 1987 Sep;6(9):2543-9. doi: 10.1002/j.1460-2075.1987.tb02542.x.
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Footprinting DNA-protein complexes in situ following gel retardation assays using 1,10-phenanthroline-copper ion: Escherichia coli RNA polymerase-lac promoter complexes.使用1,10 - 菲咯啉 - 铜离子在凝胶阻滞分析后原位检测DNA - 蛋白质复合物:大肠杆菌RNA聚合酶 - 乳糖启动子复合物
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