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来自鱼腥藻属的15N和13C标记培养基用于细菌素的通用同位素标记:来自嗜冷明串珠菌的亮菌素A和来自乳酸乳球菌的乳链菌肽A的核磁共振共振归属

15N- and 13C-labeled media from Anabaena sp. for universal isotopic labeling of bacteriocins: NMR resonance assignments of leucocin A from Leuconostoc gelidum and nisin A from Lactococcus lactis.

作者信息

Sailer M, Helms G L, Henkel T, Niemczura W P, Stiles M E, Vederas J C

机构信息

Department of Chemistry, University of Alberta, Edmonton, Canada.

出版信息

Biochemistry. 1993 Jan 12;32(1):310-8. doi: 10.1021/bi00052a039.

DOI:10.1021/bi00052a039
PMID:8418850
Abstract

A procedure for universal 13C and/or 15N labeling of microbial peptides which are produced by fermentation in complex media and its application to two food-preserving bacteriocins from lactic acid bacteria are described. Isotopic enrichment of nisin A (from Lactococcus lactis) and of leucocin A (from Leuconostoc gelidum) is readily achieved using a soluble peptone derived from enzymatic hydrolysis (pepsin and chymopapain) of Anabaena sp. ATCC 27899 cells grown on sodium [13C]bicarbonate and/or sodium [15N]nitrate as sole carbon and nitrogen sources. Combustion of this peptone followed by mass spectrometric analysis indicates that 45% of the labeled carbon and 65% of the labeled nitrogen added to the Anabaena culture are utilized in the amino acids of the peptone and that the isotopic purity for both 13C and 15N remains essentially unchanged provided that the cells are grown under argon atmosphere to avoid nitrogen fixation. NMR analyses of [13C,15N]nisin A using H[13C]MQC, H[13C]MBC, 2D INADEQUATE, and H[15N]MQC techniques confirmed 1H spectral assignments previously reported for unlabeled material and readily provided carbon and nitrogen assignments. The results show that universal but not uniform 13C labeling occurs unless the nutrient source is completely isotopically enriched at high level (> or = 98%) because of differential levels of de novo amino acid synthesis. Application of NMR techniques such as TOCSY, DQF-COSY, NOESY, and H[13C]MQC to unlabeled and [13C]leucocin A afforded the complete 1H and 13C assignment. Leucocin A does not possess clearly defined conformational structure in DMSO or aqueous solutions.

摘要

描述了一种对在复杂培养基中发酵产生的微生物肽进行通用13C和/或15N标记的方法及其在两种来自乳酸菌的食品保鲜细菌素中的应用。使用源自鱼腥藻属ATCC 27899细胞(以[13C]碳酸氢钠和/或[15N]硝酸钠作为唯一碳源和氮源生长)经酶解(胃蛋白酶和木瓜凝乳蛋白酶)得到的可溶性蛋白胨,可轻松实现乳酸乳球菌产生的乳链菌肽A和嗜冷明串珠菌产生的亮菌素A的同位素富集。该蛋白胨燃烧后进行质谱分析表明,添加到鱼腥藻培养物中的45%的标记碳和65%的标记氮用于蛋白胨的氨基酸中,并且只要细胞在氩气气氛下生长以避免固氮,13C和15N的同位素纯度基本保持不变。使用H[13C]MQC、H[13C]MBC、二维INADEQUATE和H[15N]MQC技术对[13C,15N]乳链菌肽A进行NMR分析,证实了先前报道的未标记物质的1H光谱归属,并轻松提供了碳和氮的归属。结果表明,除非营养源在高水平(≥98%)完全同位素富集,否则会发生通用但不均匀的13C标记,这是由于从头氨基酸合成水平不同所致。将TOCSY、DQF-COSY、NOESY和H[13C]MQC等NMR技术应用于未标记的和[13C]亮菌素A,得到了完整的1H和13C归属。亮菌素A在DMSO或水溶液中不具有明确界定的构象结构。

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