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(1-氟乙烯基)甘氨酸对色氨酸合酶的抑制作用。

Inhibition of tryptophan synthase by (1-fluorovinyl)glycine.

作者信息

Xu Y, Abeles R H

机构信息

Graduate Department of Biochemistry, Brandeis University, Waltham, Massachusetts 02254.

出版信息

Biochemistry. 1993 Jan 26;32(3):806-11. doi: 10.1021/bi00054a010.

Abstract

Tryptophan synthase (alpha 2 beta 2 complex) from Salmonella typhimurium catalyzes the formation of tryptophan from serine and indole. The enzyme is inactivated by (1-fluorovinyl)glycine. Concomitant with enzyme inactivation, the absorbance at 485 nm increases, indicating covalent modification of pyridoxal 5'-phosphate. It is proposed that inactivation involves elimination of HF to form an allene, which reacts with a nucleophile at the active site. The inactivation reaction involves an alpha,beta-elimination, as does the formation of tryptophan from indole and serine. The inactivation occurs with k(in) > 1.3 s-1, which is very close to k(cat) (6.4 s-1) for the formation of tryptophan from indole and serine. The inactive enzyme (alpha 2 beta 2) regains activity with k(off) = 0.005 min-1. Aminoacetone is formed during reaction, and pyridoxal 5'-phosphate is regenerated. Tryptophan synthase also catalyzes the dehydration of serine, or 3-fluoroalanine, to pyruvate in the absence of indole. This reaction involves an alpha,beta-elimination and the intermediate formation of an aminoacrylate adduct with pyridoxal 5'-phosphate, as does the formation of tryptophan. Pyruvate formation proceeds at less than 5% the rate of tryptophan formation. With [2-2H]serine an isotope effect (DVmax = 1.5) is observed. We propose that pyruvate formation is limited by the rate of hydration of the aminoacrylate intermediate and the rate of the abstraction of the serine alpha-hydrogen.

摘要

鼠伤寒沙门氏菌的色氨酸合酶(α₂β₂复合物)催化由丝氨酸和吲哚形成色氨酸。该酶被(1-氟乙烯基)甘氨酸灭活。随着酶的失活,485nm处的吸光度增加,表明5'-磷酸吡哆醛发生了共价修饰。有人提出失活涉及HF的消除以形成丙二烯,丙二烯与活性位点的亲核试剂反应。失活反应涉及α,β-消除,从吲哚和丝氨酸形成色氨酸的反应也是如此。失活以k(in)>1.3 s⁻¹的速率发生,这与从吲哚和丝氨酸形成色氨酸的k(cat)(6.4 s⁻¹)非常接近。无活性的酶(α₂β₂)以k(off)=0.005 min⁻¹的速率恢复活性。反应过程中形成氨基丙酮,5'-磷酸吡哆醛得以再生。在没有吲哚的情况下,色氨酸合酶还催化丝氨酸或3-氟丙氨酸脱水生成丙酮酸。该反应涉及α,β-消除以及与5'-磷酸吡哆醛形成氨基丙烯酸酯加合物的中间过程,并与色氨酸的形成过程相同。丙酮酸的形成速率不到色氨酸形成速率的5%。使用[2-²H]丝氨酸时观察到同位素效应(DVmax = 1.5)。我们认为丙酮酸的形成受氨基丙烯酸酯中间体的水合速率和丝氨酸α-氢的提取速率限制。

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